gnu: julia-datastructures: Fix tests on i686-linux. * gnu/packages/julia-xyz.scm (julia-datastructures)[arguments]<#:phases>: Conditionnally disable the failing test. Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
gnu: libunwind-julia: Fix build on i686-linux. * gnu/packages/julia.scm (libunwind)[origin]<patches>: Add patch. * gnu/packages/patches/libunwind-julia-fix-GCC10-fno-common.patch: New file. * gnu/local/mk (dist_patch_DATA): Register it. Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
gnu: plink-ng: Enable tests. * gnu/packages/bioinformatics.scm (plink-ng)[arguments]: Replace 'check phase to run tests; do not disable tests via arguments. [native-inputs]: Add diffutils, plink, and python.
gnu: plink-ng: Replace reference to %outputs. * gnu/packages/bioinformatics.scm (plink-ng)[arguments]: Remove reference to %outputs by using a gexp.
gnu: plink: Remove reference to %build-inputs. * gnu/packages/bioinformatics.scm (plink)[arguments]: Use a gexp to replace reference to %build-inputs.
gnu: plink: Remove trailing #T. * gnu/packages/bioinformatics.scm (plink)[arguments]: Remove trailing #T from build phase.
gnu: rsem: Update to 1.3.3. * gnu/packages/bioinformatics.scm (rsem): Update to 1.3.3. [arguments]: Build with gnu++11 standard; patch sources for compatibility.
gnu: rsem: Remove trailing #T. * gnu/packages/bioinformatics.scm (rsem)[arguments]: Remove trailing #T from build phases.
gnu: rsem: Remove references to %build-inputs. * gnu/packages/bioinformatics.scm (rsem)[arguments]: Use a gexp.
gnu: rsem: Remove trailing #T from snippet. * gnu/packages/bioinformatics.scm (rsem)[source]: Remove trailing #T.
gnu: prodigal: Remove reference to %outputs. * gnu/packages/bioinformatics.scm (prodigal)[arguments]: Remove reference to %outputs by using a gexp.
gnu: prank: Bind INPUTS in 'install phase. * gnu/packages/bioinformatics.scm (prank)[arguments]: Bind INPUTS in 'install phase to remove references to %build-inputs.
gnu: prank: Remove trailing #T. * gnu/packages/bioinformatics.scm (prank)[arguments]: Remove trailing #T from build phases.
gnu: mash: Replace references to %build-inputs. * gnu/packages/bioinformatics.scm (mash)[arguments]: Use a gexp.
gnu: mash: Move htslib and capnproto to regular inputs. * gnu/packages/bioinformatics.scm (mash)[native-inputs]: Move htslib and capnproto from here... [inputs]: ...to here.
gnu: mash: Simplify snippet. * gnu/packages/bioinformatics.scm (mash)[snippet]: Simplify.
gnu: mafft: Remove trailing #T. * gnu/packages/bioinformatics.scm (mafft)[arguments]: Remove trailing #T from build phase.
gnu: mafft: Replace references to %build-inputs and %outputs. * gnu/packages/bioinformatics.scm (mafft)[arguments]: Replace references to %outputs with a gexp; replace reference to %build-inputs in the 'wrap-programs phase by binding INPUTS.
gnu: jellyfish: Replace reference to %outputs. * gnu/packages/bioinformatics.scm (jellyfish)[arguments]: Use a gexp.
gnu: fastp: Replace reference to %outputs. * gnu/packages/bioinformatics.scm (fastp)[arguments]: Use a gexp.