services: syslog: Log auth.info to /var/log/secure in default configuration.

This causes authentication failures such as those generated by SSH brute force
attacks to appear in /var/log/secure, which is picked up by tools such as
fail2ban.

* gnu/services/base.scm (%default-syslog.conf): Add a auth.info selector for
the /var/log/secure log.

Series-to: 62802@debbugs.gnu.org

services/syslog: Strip leading white space indent in syslog.conf.

This is a cosmetic change.

* gnu/services/base.scm (%default-syslog.conf): Add a comment referencing the
documentation.  Strip the extraneous leading trailing white space indent.

services: syslog: Add a reload action.

* gnu/services/base.scm (syslog-service-type) [actions]: Add a reload action.
* doc/guix.texi (Base Services): Document it.

services: syslog: Move configuration to /etc/syslog.conf.

Having the configuration live at a static location makes it possible to
hot-reload it.

* gnu/services/base.scm (syslog.conf): New variable.
(syslog-etc, syslog-shepherd-service): New procedures.
(syslog-service-type): Rewrite using the above new variable and procedures,
extending etc-service-type with its configuration file.

gnu: bppsuite: Update to 2.4.1.

* gnu/packages/bioinformatics.scm (bppsuite): Update to 2.4.1.
[source]: Remove the commit and use the release version. Changed to the github
repo.
[arguments]: Remove the disabled parallel-build.
[inputs]: Use list.
[home-page]: Changed to github page.

gnu: bpp-popgen: Update to 2.4.1.

* gnu/packages/bioinformatics.scm (bpp-popgen): Update to 2.4.1.
[source]: Remove the commit and use the release version. Changed to the github
repo.
[arguments]: Remove the disabled parallel-build.
[home-page]: Changed to new host Université Claude-Bernard Lyon 1.

gnu: Add maffilter.

* gnu/packages/bioinformatics.scm (maffilter): New variable.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>

gnu: Add bpp-phyl-omics.

* gnu/packages/bioinformatics.scm (bpp-phyl-omics): New variable.

gnu: Add bpp-seq-omics.

* gnu/packages/bioinformatics.scm (bpp-seq-omics): New variable.

gnu: bpp-phyl: Update to 2.4.1.

* gnu/packages/bioinformatics.scm (bpp-phyl): Update to 2.4.1.

[source]: Remove the commit and use the release version. Changed to the github
repo.
[arguments]: Remove the disabled parallel-build and out-of-source.
[home-page]: Changed to new host Université Claude-Bernard Lyon 1.
[synopsis]: Use proper capitalization.

gnu: bpp-seq: Update to 2.4.1.

* gnu/packages/bioinformatics.scm (bpp-seq): Update to 2.4.1.

[source]: Remove the commit and use the release version. Changed to the github
repo.
[arguments]: Remove the disabled parallel-build and out-of-source.
[home-page]: Changed to new host Université Claude-Bernard Lyon 1.

gnu: bpp-core: Update to 2.4.1.

* gnu/packages/bioinformatics.scm (bpp-core): Update to 2.4.1.

[source]: Remove the commit and use the release version. Changed to the github
stored sources.
[arguments]: Remove the disabled parallel-build.
[home-page]: Changed to new host Université Claude-Bernard Lyon 1.

gnu: luakit: Further improve style.

This is a followup to d3bc56da0475bc643ccb065483c53c6d28cf8e39.

* gnu/packages/web-browsers.scm (luakit)[arguments]<#:phases>: Remove
unnecessary INPUTS key.
[inputs]: Sort alphabetically.

gnu: luakit: Improve package style.

* gnu/packages/web-browsers.scm (luakit)[arguments]<#:tests?>: Properly
disable tests instead of deleting CHECK phase.
<#:make-flags, #:phases>: Use G-expressions.  Remove trailing #T.
<#:test-targes>: Add it, for the record.
[inputs]: Remove labels.

gnu: Add alienblaster.

* gnu/packages/games.scm (alienblaster): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>

gnu: Add clog.

* gnu/packages/parallel.scm (clog): New variable.
* gnu/packages/patches/clog-fix-shared-build.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>

gnu: a2ps: Update to 4.15.4

* gnu/packages/pretty-print.scm (a2ps): Update to 4.15.4

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>

gnu: kakoune: update to 2022.10.31.

* gnu/packages/text-editors.scm (kakoune): Update to 2022.10.31.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>

gnu: terminator: Update to 2.1.3

* gnu/packages/gnome.scm (terminator): Update to 2.1.3

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>

gnu: wlr-randr: Update to 0.3.0.

* gnu/packages/wm.scm (wlr-randr): Update to 0.3.0.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>