~ruther/guix-local

7c75228c8ba4aaeb8935e9d49db514749cb79f06 — Mădălin Ionel Patrașcu 3 years ago 722a8b2
gnu: Add bpp-phyl-omics.

* gnu/packages/bioinformatics.scm (bpp-phyl-omics): New variable.
1 files changed, 28 insertions(+), 0 deletions(-)

M gnu/packages/bioinformatics.scm
M gnu/packages/bioinformatics.scm => gnu/packages/bioinformatics.scm +28 -0
@@ 2267,6 2267,34 @@ analysis, phylogenetics, molecular evolution and population genetics.  This
library provides phylogenetics-related modules.")
    (license license:cecill-c)))

(define-public bpp-phyl-omics
  (package
    (name "bpp-phyl-omics")
    (version "2.4.1")
    (source
      (origin
       (method git-fetch)
       (uri (git-reference
            (url "https://github.com/BioPP/bpp-phyl-omics")
            (commit (string-append "v" version))))
        (file-name (git-file-name name version))
        (sha256
         (base32 "172psb8njkjwg3cd6gdy5w0mq8f0817v635yw4bk7146aggjzl1h"))))
    (build-system cmake-build-system)
    (arguments
     (list #:tests? #f)) ; No test provided.
    (inputs
     (list bpp-core
           bpp-phyl
           bpp-seq
           bpp-seq-omics))
    (home-page "https://github.com/BioPP/bpp-phyl-omics")
    (synopsis "Bio++ phylogenetic library genomics components")
    (description
     "This library contains the genomics components of the Bio++ phylogenetics
library.  It is part of the Bio++ project.")
    (license license:cecill)))

(define-public bpp-popgen
  ;; The last release was in 2014 and the recommended way to install from source
  ;; is to clone the git repository, so we do this.