gnu: r-hpo-db: Include HPO sqlite database.

* gnu/packages/bioconductor.scm (r-hpo-db)[arguments]: Bypass fetching of the
database from the internet when in build environment.
[native-inputs]: Add HPO.sqlite.

Change-Id: Ie01605ef2531d992fb85c07bae5cfaabda626ea6

gnu: r-rhdf5lib: Adjust modifications to Makevars.

* gnu/packages/bioconductor.scm (r-rhdf5lib)[arguments]: Adjust patch.

Change-Id: Iaef3d2d80c22de1c2a0b64e7c13f5fa3b8e5719d

gnu: r-phyloseq: Update to 1.46.0.

* gnu/packages/bioconductor.scm (r-phyloseq): Update to 1.46.0.

Change-Id: Id11b5e913529ac8efce0d046168f4a9dbe0dbabd

gnu: r-tximeta: Update to 1.20.0.

* gnu/packages/bioconductor.scm (r-tximeta): Update to 1.20.0.

Change-Id: I8d9c5d01efc8f6c64290cdfdd193d95cd1da9152

gnu: r-tricycle: Update to 1.10.0.

* gnu/packages/bioconductor.scm (r-tricycle): Update to 1.10.0.

Change-Id: I72a9e1140c17ce8605bfe6e83cc290eb1ae2fad2

gnu: r-tcgabiolinks: Update to 2.30.0.

* gnu/packages/bioconductor.scm (r-tcgabiolinks): Update to 2.30.0.

Change-Id: If7e571bfa6454bfa94dd395606575391dc506ecd

gnu: r-biscuiteer: Update to 1.16.0.

* gnu/packages/bioconductor.scm (r-biscuiteer): Update to 1.16.0.

Change-Id: Ib6cffbbeedfe87932acfcbfb2b789b4c92a9bf81

gnu: r-omnipathr: Update to 3.10.1.

* gnu/packages/bioconductor.scm (r-omnipathr): Update to 3.10.1.
[propagated-inputs]: Add r-lubridate and r-stringi.

Change-Id: Ia18b66848cd6996dfdc551bf4b182bb5ac3e17a8

gnu: r-omicade4: Update to 1.42.0.

* gnu/packages/bioconductor.scm (r-omicade4): Update to 1.42.0.

Change-Id: I4369e5721116bf73f096ee39a516ada94c348872

gnu: r-dmrseq: Update to 1.22.0.

* gnu/packages/bioconductor.scm (r-dmrseq): Update to 1.22.0.

Change-Id: I738c2fb7e0fa3e816d3767f854b8f9ed77425591

gnu: r-dada2: Update to 1.30.0.

* gnu/packages/bioconductor.scm (r-dada2): Update to 1.30.0.

Change-Id: I0955c3a61b4d81cd6809e2eb287d8acfcccfb789

gnu: r-bsseq: Update to 1.38.0.

* gnu/packages/bioconductor.scm (r-bsseq): Update to 1.38.0.

Change-Id: Ie31f0b5c726da98a0caa4c658a5c62c1a5f40eaa

gnu: r-biotmle: Update to 1.26.0.

* gnu/packages/bioconductor.scm (r-biotmle): Update to 1.26.0.

Change-Id: Ied1d1e649fba277aa724040af31334f664d2debd

gnu: r-biotip: Update to 1.16.0.

* gnu/packages/bioconductor.scm (r-biotip): Update to 1.16.0.

Change-Id: I73503554b0271e5fe950c6da367b4893972f27e9

gnu: r-bioqc: Update to 1.30.0.

* gnu/packages/bioconductor.scm (r-bioqc): Update to 1.30.0.

Change-Id: I0b5fd7cac1283a7f12a1221ad453eb56767e8b90

gnu: r-bionetstat: Update to 1.22.0.

* gnu/packages/bioconductor.scm (r-bionetstat): Update to 1.22.0.

Change-Id: I92f2ebef0b65b947a719bdd1008f07ce279263a4

gnu: r-bionet: Update to 1.62.0.

* gnu/packages/bioconductor.scm (r-bionet): Update to 1.62.0.

Change-Id: I0712a4ba67c27b32d6666e91d9515f0299e61848

gnu: r-bionero: Update to 1.10.0.

* gnu/packages/bioconductor.scm (r-bionero): Update to 1.10.0.

Change-Id: I396a37dd28571a471b45d4d8aca6ce40a1cbd384

gnu: r-biomvcclass: Update to 1.70.0.

* gnu/packages/bioconductor.scm (r-biomvcclass): Update to 1.70.0.

Change-Id: I0c6214669ec284d314eb7dc90270558934070e4b

gnu: r-mvcclass: Update to 1.76.0.

* gnu/packages/bioconductor.scm (r-mvcclass): Update to 1.76.0.

Change-Id: I6e7fa851c804009ae41a955b117d95b33fd1b2f0