~ruther/guix-local

a9383428994dbe1b3266bfe020aba3c31e3a75f4 — Ricardo Wurmus 2 years ago c82c9c8
gnu: r-rhdf5lib: Adjust modifications to Makevars.

* gnu/packages/bioconductor.scm (r-rhdf5lib)[arguments]: Adjust patch.

Change-Id: Iaef3d2d80c22de1c2a0b64e7c13f5fa3b8e5719d
1 files changed, 3 insertions(+), 2 deletions(-)

M gnu/packages/bioconductor.scm
M gnu/packages/bioconductor.scm => gnu/packages/bioconductor.scm +3 -2
@@ 20569,8 20569,6 @@ block processing.")
               (substitute* "Makevars"
                 (("@BUILD_HDF5@") "")
                 (("@COPY_SZIP@") "")
                 (("@ZLIB_LIB@") "-lz")
                 (("@ZLIB_INCLUDE@") "")
                 (("HDF5_CXX_LIB=.*")
                  (string-append "HDF5_CXX_LIB="
                                 (assoc-ref inputs "hdf5") "/lib/libhdf5_cpp.a\n"))


@@ 20587,6 20585,9 @@ block processing.")
                 (("HDF5_HL_CXX_LIB=.*")
                  (string-append "HDF5_HL_CXX_LIB="
                                 (assoc-ref inputs "hdf5") "/lib/libhdf5_hl_cpp.a\n"))
                 (("@ZLIB_LIB_PATH@") "-lz")
                 (("@ZLIB_INCLUDE_PATH@") "")

                 ;; szip is non-free software
                 (("cp \"\\$\\{SZIP_LIB\\}.*") "")
                 (("PKG_LIBS =.*") "PKG_LIBS = -lz -lhdf5\n"))))))))