gnu: python-pysnptools: Update to 0.5.14.

* gnu/packages/python-xyz.scm (python-pysnptools): Update to 0.5.14.
[build-system]: Use pyproject-build-system.
[arguments]: Remove custom 'check phase.
[propagated-inputs]: Remove python-dill; add python-bed-reader,
python-cloudpickle, and python-more-itertools.
[native-inputs]: Remove python-cython; add python-pytest, python-pytest-cov,
python-pytest-datadir, python-pytest-doctestplus, python-setuptools,
python-sphinx, python-sphinx-rtd-theme, and python-wheel.

Change-Id: I685f819e70ab209198b504c6e41b253dc5a1d876

gnu: Add python-bed-reader.

* gnu/packages/bioinformatics.scm (python-bed-reader): New variable.

Change-Id: Iad3f1d1c05abe706d8cd52a4d046247a5a9738e2

gnu: Add rust-numpy-0.22.

* gnu/packages/crates-io.scm (rust-numpy-0.22): New variable.

Change-Id: Iba01905cb4284671771c195f8777e4c8179683b2

gnu: Add rust-rusoto-credential-0.48.

* gnu/packages/crates-web.scm (rust-rusoto-credential-0.48): New variable.

Change-Id: I22ff3f5a1b27bbbd3ca9204e26b9c6dadd440c53

gnu: Add rust-ndarray-rand-0.15.

* gnu/packages/crates-io.scm (rust-ndarray-rand-0.15): New variable.

Change-Id: I67863ccb0fdb7b74b40985a8162a2cfb6f236def

gnu: Add rust-ndarray-npy-0.9.

* gnu/packages/crates-io.scm (rust-ndarray-npy-0.9): New variable.

Change-Id: I69bb42218e09a32250e8feeee0d6ca8e0a1a9845

gnu: Add rust-object-store-0.11.

* gnu/packages/crates-io.scm (rust-object-store-0.11): New variable.

Change-Id: If6009cfde48eeffde5bc4055c943c4fe8a6ff797

gnu: Add rust-statrs-0.17.

* gnu/packages/crates-io.scm (rust-statrs-0.17): New variable.

Change-Id: I3c7ea9f6ecb2d635e62f5e655d9291064ff4b25a

gnu: Add rust-py-literal-0.4.

* gnu/packages/crates-io.scm (rust-py-literal-0.4): New variable.

Change-Id: Ie5b845a642bf862f062d3160e856969da9b21f3a

gnu: Add rust-fetch-data-0.2.

* gnu/packages/crates-io.scm (rust-fetch-data-0.2): New variable.

Change-Id: Ie323074ac7bbe648b17a08ae13305d7bad466879

gnu: Add rust-dpc-pariter-0.4.

* gnu/packages/crates-io.scm (rust-dpc-pariter-0.4): New variable.

Change-Id: I6e6f278e62f3b68ce7211fb01cc109bbf5db42f1

gnu: Add rust-cloud-file-0.2.

* gnu/packages/crates-io.scm (rust-cloud-file-0.2): New variable.

Change-Id: Ib41346daa3a225a88549c320c4f46600c6276526

gnu: Add rust-anyinput-0.1.

* gnu/packages/crates-io.scm (rust-anyinput-0.1): New variable.

Change-Id: I5347d8bb51b18c6de5026d0e598fdbdea360a15d

gnu: Add rust-anyinput-derive-0.1.

* gnu/packages/crates-io.scm (rust-anyinput-derive-0.1): New variable.

Change-Id: If0e113e1822fb110ea8b11019d87aad899da90c3

gnu: Add rust-anyinput-core-0.1.

* gnu/packages/crates-io.scm (rust-anyinput-core-0.1): New variable.

Change-Id: I158924de285938697ad286a44936a93ecb440f4a

gnu: Add rust-ndarray-0.16.

* gnu/packages/crates-io.scm (rust-ndarray-0.16): New variable.

Change-Id: Idce1bf031c473b803d8c6e3b9cc7505277cad91c

gnu: wllvm: Add missing inputs.

* gnu/packages/llvm.scm (wllvm)[native-inputs]: Add python-setuptools and
python-wheel.

Change-Id: I080f132763607f7bc5f4609c993bd2a067cd9be4

gnu: python-more-itertools: Update to 10.6.0.

* gnu/packages/python-xyz.scm (python-more-itertools-next): Rename this
variable...
(python-more-itertools): ...to this; update to 10.6.0.
[propagated-inputs]: Remove python-six.
* gnu/packages/astronomy.scm (python-yt)[propagated-inputs]: Replace
python-more-itertools-next with python-more-itertools.

Change-Id: I2fef91f87afde2b2659dd25b831fb13b4c118454

gnu: python-incremental: Update to 24.7.2.

* gnu/packages/python-xyz.scm (python-incremental): Update to 24.7.2.
[build-system]: Use pyproject-build-system.
[arguments]: Add phase 'patch-build-system; disable tests.
[native-inputs]: Add python-pytest, python-setuptools, and python-wheel.
[propagated-inputs]: Add python-tomli.

Change-Id: I6c49f2da746398d469f6fdc611fc08cfbe72a0e1

gnu: python-gymnasium: Add missing input.

* gnu/packages/machine-learning.scm (python-gymnasium)[native-inputs]: Add
python-wheel.

Change-Id: I118aa4283767906c59a6daa93d0ba01bfbfb6029