gnu: Add python-pip.
* gnu/packages/python.scm (python-pip, python2-pip): New variables.
build: Fix libgcrypt detection on FHS systems.
Reported by Christopher Allan Webber <cwebber@dustycloud.org>.
* m4/guix.m4 (GUIX_LIBGCRYPT_LIBDIR): Add "grep -e -L" to the pipeline
to account for cases where the output of "libgcrypt-config --libs"
lacks a -L flag.
* configure.ac: When 'GUIX_LIBGCRYPT_LIBDIR' returns the empty string,
set LIBGCRYPT_LIBDIR to "no".
* config-daemon.ac: Add missing space.
scripts: environment: Use system* instead of system.
This allows for direct program invokation without needing a shell to act
as a command interpreter.
* guix/scripts/environment.scm (%default-shell): New variable.
(show-help): Adjust description. Remove '--exec' reference.
(%default-options): Use '%default-shell'.
(%options): Adjust '--exec' to run command via the default shell.
(parse-args): New procedure.
(guix-environment): Use 'parse-args'. Use 'system*' instead of
'system'.
* tests/guix-environment.sh: Add test for '--' command invokation.
* doc/guix.texi ("Invoking guix environment"): Use new syntax. Remove
'--exec' documentation.
utils: Add split procedure.
* guix/utils.scm (split): New procedure.
* tests/utils.scm: Add tests.
emacs: Add 'guix-devel-lint-package'
Suggested by Ludovic Courtès <ludo@gnu.org>.
* emacs/guix-devel.el (guix-devel-setup-repl): Add a workaround for
'guix-warning-port'.
(guix-devel-lint-package): New command.
(guix-devel-keys-map): Add key binding for it.
* doc/emacs.texi (Emacs Development): Document it.
lint: Export 'run-checkers'.
* guix/scripts/lint.scm (run-checkers): Export. Make 'checkers'
argument optional.
emacs: Add 'guix-devel-with-definition'.
* emacs/guix-devel.el (guix-devel-with-definition): New macro.
(guix-devel-build-package-definition): Use it.
(guix-devel-emacs-font-lock-keywords): New variable.
emacs: Fix 'guix-devel-setup-repl'.
Setting up guix ports needs to be done in Geiser REPL synchronously,
otherwise this operation may not be finished before the further
evaluating of guile code.
* emacs/guix-guile.el (guix-guile-prompt?): New function.
* emacs/guix-geiser.el (guix-geiser-eval-in-repl-synchronously): New
function.
* emacs/guix-devel.el (guix-devel-setup-repl): Use it.
emacs: Fix 'guix-build-log-phase-toggle-all'.
* emacs/guix-build-log.el (guix-build-log-phase-toggle-all): Handle the
case when there are no characters before the first phase:
'guix-build-log-next-phase' moves to the second phase in such a case,
and the toggling is not done properly, so use 're-search-forward'
instead.
emacs: devel: Fix 'modify-phases' highlighting.
* emacs/guix-devel.el (guix-devel-modify-phases-font-lock-pre): Handle
the case when 'modify-phases' is commented.
emacs: devel: Highlight gexp symbols.
Suggested by Ludovic Courtès <ludo@gnu.org>.
* emacs/guix-devel.el (guix-devel-gexp-symbol): New face.
(guix-devel-font-lock-keywords): Adjust to handle gexp symbols.
gnu: libunwind: Add fix for CVE-2015-3239.
* gnu/packages/patches/libunwind-CVE-2015-3239.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/libunwind.scm (libunwind)[source]: Add patch.
gnu: libwmf: Add fixes for several security flaws.
* gnu/packages/patches/libwmf-CAN-2004-0941.patch,
gnu/packages/patches/libwmf-CVE-2007-0455.patch,
gnu/packages/patches/libwmf-CVE-2007-2756.patch,
gnu/packages/patches/libwmf-CVE-2007-3472.patch,
gnu/packages/patches/libwmf-CVE-2007-3473.patch,
gnu/packages/patches/libwmf-CVE-2007-3477.patch,
gnu/packages/patches/libwmf-CVE-2009-3546.patch: New files.
* gnu/packages/patches/libwmf-CVE-2015-0848+4588+4695+4696.patch: Delete
file. Replace with ...
* gnu/packages/patches/libwmf-CVE-2015-0848+CVE-2015-4588.patch,
gnu/packages/patches/libwmf-CVE-2015-4695.patch,
gnu/packages/patches/libwmf-CVE-2015-4696.patch: ... these new files.
* gnu-system.am (dist_patch_DATA): Adjust accordingly.
* gnu/packages/image.scm (libwmf)[source]: Adjust set of patches.
gnu: unzip: Add various fixes.
* gnu/packages/patches/unzip-increase-size-of-cfactorstr.patch: Delete
file. Replace with ...
* gnu/packages/patches/unzip-overflow-long-fsize.patch: ... this new file.
* gnu/packages/patches/unzip-attribs-overflow.patch,
gnu/packages/patches/unzip-fix-overflows-and-infloop.patch,
gnu/packages/patches/unzip-format-secure.patch: New files.
* gnu/packages/patches/unzip-CVE-2014-9636.patch: Replace contents with
fixed patch from Fedora.
* gnu-system.am (dist_patch_DATA): Adjust accordingly.
* gnu/packages/zip.scm (unzip)[source]: Adjust list of patches.
gnu: wpa-supplicant: Update to 2.5.
* gnu/packages/patches/wpa-supplicant-2015-2-fix.patch,
gnu/packages/patches/wpa-supplicant-2015-3-fix.patch,
gnu/packages/patches/wpa-supplicant-2015-4-fix-pt1.patch,
gnu/packages/patches/wpa-supplicant-2015-4-fix-pt2.patch,
gnu/packages/patches/wpa-supplicant-2015-4-fix-pt3.patch,
gnu/packages/patches/wpa-supplicant-2015-4-fix-pt4.patch,
gnu/packages/patches/wpa-supplicant-2015-4-fix-pt5.patch,
gnu/packages/patches/wpa-supplicant-2015-5-fix.patch,
gnu/packages/patches/wpa-supplicant-CVE-2015-1863.patch: Delete files.
* gnu-system.am (dist_patch_DATA): Remove them.
* gnu/packages/admin.scm (wpa-supplicant-minimal): Update to 2.5.
Remove patches.
gnu: python-h5py: Fix path to hdf5 library.
* gnu/packages/python.scm (python-h5py)[arguments]: Add "fix-hdf5-paths"
phase.
gnu: python-h5py, python2-h5py: Correct inputs.
* gnu/packages/python.scm (python-h5py)
[inputs]: Remove python-cython and python-numpy.
[propagated-inputs]: New field.
[native-inputs]: Drop python-setuptools and add python-cython.
(python2-h5py): Replace "inputs" with "propagated-inputs".
gnu: Add python-joblib.
* gnu/packages/python.scm (python-joblib, python2-joblib): New
variables.