gnu: python-h5py: Fix path to hdf5 library.
* gnu/packages/python.scm (python-h5py)[arguments]: Add "fix-hdf5-paths"
phase.
gnu: python-h5py, python2-h5py: Correct inputs.
* gnu/packages/python.scm (python-h5py)
[inputs]: Remove python-cython and python-numpy.
[propagated-inputs]: New field.
[native-inputs]: Drop python-setuptools and add python-cython.
(python2-h5py): Replace "inputs" with "propagated-inputs".
gnu: Add python-joblib.
* gnu/packages/python.scm (python-joblib, python2-joblib): New
variables.
gnu: webkitgtk-2.4: Fix potential code execution vulnerability.
* gnu/packages/patches/webkitgtk-2.4-sql-init-string.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/webkit.scm (webkitgtk-2.4)[source]: Add patch.
gnu: libvpx: Set size limit to avoid CVE-2015-1258.
* gnu/packages/video.scm (libvpx)[arguments]: Add "--size-limit"
argument to configure.
gnu: openjpeg-2.x: Add fix for CVE-2015-6581.
* gnu/packages/patches/openjpeg-CVE-2015-6581.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/image.scm (openjpeg, openjpeg-2.0)[source]: Add patch.
gnu: camlp4: Remove extra input.
* gnu/packages/ocaml.scm (camlp4)[inputs]: Removed duplicate "ocaml"
entry from native-inputs.
gnu: gprolog: Remove armhf from supported architectures.
* gnu/packages/gprolog.scm (gprolog)[supported-systems]: Remove
armhf-linux from the list of supported systems.
gnu: mosh: Update to 1.2.5.
* gnu/packages/ssh.scm (mosh): Update to 1.2.5.
gnu: enlightenment: Update to 0.19.12.
* gnu/packages/enlightenment.scm (enlightenment): Update to 0.19.12.
gnu: Add r-htmlwidgets.
* gnu/packages/web.scm (r-htmlwidgets): New variable.
gnu: Add r-htmltools.
* gnu/packages/web.scm (r-htmltools): New variable.
gnu: ibus-libpinyin: Add GTK+ and Glib inputs.
* gnu/packages/ibus.scm (ibus-libpinyin)[inputs]: Add gtk+.
[native-inputs]: Add glib:bin.
gnu: imagemagick: Hard-code delegate paths.
If --with-frozenpaths is given, then configure will retain absolute paths
discovered for delegate programs, otherwise they are discarded.
* gnu/packages/imagemagick.scm (imagemagick)[arguments]: Add
'--with-frozenpaths' to #:configure-flags.
publish: Fix file descriptor leak.
A client closing the connection while reading from a /nar URL would
leave an open file descriptor in the server. This patch fixes it.
* guix/scripts/publish.scm (swallow-EPIPE): New macro.
(http-write): Use it around 'write-file' call.
doc: Clarify how to run 'guix refresh -u'.
* doc/guix.texi (Invoking guix refresh): Mention ./pre-inst-env.
import: snix: Adjust names of license attributes.
* guix/import/snix.scm (license-variable): Adjust names to current
Nixpkgs.
utils: Remove Nixpkgs helpers.
* guix/config.scm.in (%nixpkgs): Remove.
* guix/utils.scm (%nixpkgs-directory, nixpkgs-derivation,
nixpkgs-derivation*): Remove.
* test-env.in: Export 'NIXPKGS'.
* tests/derivations.scm (%coreutils): Remove use of
'nixpkgs-derivation'.
* tests/snix.scm (%nixpkgs-directory): New variable.
Adjust users accordingly.