gnu: python-black: Move to pyproject-build-system.

* gnu/packages/python-xyz.scm (python-black): Improve package style.
  [build-system]: Move to pyproject-build-system.
  [arguments]<#:phases>: Improve style of use-absolute-file-names
  phase. Remove phase check.

Change-Id: If2da4b3b0fea4928d1aeb270fbaa4167f20a6ee5
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>

gnu: python-transient: Move to pyproject-build-system.

* gnu/packages/virtualization.scm (python-transient)[build-system]:
Move to pyproject-build-system.

Change-Id: I29969738f862ea26fbaa9cb7642f98336f37c583
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>

gnu: python-seaborn: Correct dependencies.

* gnu/packages/python-xyz.scm (python-seaborn): Correct dependencies.
  [propagated-inputs]: Move python-ipykernel, python-mypy,
  python-nbconvert, python-numpydoc, python-pyyaml from here...
  [native-inputs]: ... to here.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
Change-Id: If0270db33d79e5d294235695375e6ff1d51d8130

gnu: python-ipywidgets: Update to 8.1.2.

* gnu/packages/python-xyz.scm (python-ipywidgets): Update to 8.1.2.
[propagated-inputs]: Add python-comm; remove python-ipykernel and
python-nbformat.
[native-inputs]: Add python-ipykernel, python-jsonschema, and python-pytz;
remove python-mock.

Change-Id: Idaffb279c72af0c1ee3cb68ee18866a8b47622c4

gnu: python-jupyterlab-widgets: Update to 3.0.10.

* gnu/packages/jupyter.scm (python-jupyterlab-widgets): Update to 3.0.10.
[native-inputs]: Remove python-setuptools.

Change-Id: I806dc0df2dcc7a6782e8918162fd8a09ccaa68a7

gnu: python-ipykernel: Update to 6.29.4.

* gnu/packages/python-xyz.scm (python-ipykernel): Update to 6.29.4.
[arguments]: Disable one test, not without concern; add 'relax-a-bit phase;
rename phase 'hide-zmq-deprecation-warnings to 'hide-deprecation-warnings and
ignore more warnings; remove custom 'check phase; add 'pre-check phase.
[propagated-inputs]: Add python-comm, python-jupyter-core,
python-nest-asyncio, python-packaging, and python-pyzmq.
[native-inputs]: Add python-hatchling, python-pytest-asyncio,
python-pytest-cov, replace python-pytest-bootstrap with python-pytest, remove
python-setuptools and python-wheel.
(python-ipykernel-bootstrap)[native-inputs]: Remove python-setuptools and
python-wheel; add python-hatchling.
[propagated-inputs]: Do not append python-ipyparallel-bootstrap.

Change-Id: Ied168e967f9ced18c8885bc5de11de6d55f755e6

gnu: Add python-comm.

* gnu/packages/jupyter.scm (python-comm): New variable.

Change-Id: I888125238a566b470d4f5f96c5cc178f41a7a4ff

gnu: python-widgetsnbextension: Update to 4.0.10.

* gnu/packages/python-xyz.scm (python-widgetsnbextension): Update to 4.0.10.
[build-system]: Use pyproject-build-system.
[native-inputs]: Add python-jupyter-packaging, python-setuptools, and
python-wheel.
[propagated-inputs]: Remove python-notebook.

Change-Id: I63519916b234a45b352d0ea850566a1de42315c7

gnu: python-nbconvert: Update to 7.16.4.

* gnu/packages/python-xyz.scm (python-nbconvert): Update to 7.16.4.
[arguments]: Adjust test flags.
[native-inputs]: Add python-flaky and python-hatchling; remove
python-setuptools and python-wheel.
[propagated-inputs]: Remove python-entrypoints and python-testpath; add
python-importlib-metadata, python-markupsafe, python-packaging,
python-tinycss2, and texlive-soul.

Change-Id: I03ae560aaabd6b31bb1e5794efc4636315be3989

gnu: python-mistune: Update to 3.0.2.

* gnu/packages/python-xyz.scm (python-mistune): Update to 3.0.2.
[build-system]: Use pyproject-build-system.
[native-inputs]: Add python-setuptools and python-wheel.

Change-Id: Ia04fb0e249fe97ba2e4bf8123aeb340a8ec70953

gnu: python-pycurl: Update to 7.45.3.

* gnu/packages/python-web.scm (python-pycurl): Update to 7.45.3.
[arguments]: Adjust tests.

Change-Id: I05120931c979d292c2f888d29c80c93a82a291a0

gnu: python-pyls-black: Add missing input.

* gnu/packages/python-xyz.scm (python-pyls-black)[propagated-inputs]: Add
python-toml.

Change-Id: Ic6be8927af881916faa715bb4974007bcaf8d379

gnu: python-sphinx-4: Inherit from python-sphinx-5.

* gnu/packages/sphinx.scm (python-sphinx-4): Inherit from python-sphinx-5, in
particular the arguments field.

Change-Id: Icb15e34b7bfbe38d17f4cd64234316950437538d

gnu: python-sphinx-5: Disable failing tests.

* gnu/packages/sphinx.scm (python-sphinx-5)[arguments]: Disable three tests
that fail for silly reasons.

Change-Id: I82d9fd4465fbfe052f8aad2264a9b04d34efef89

gnu: python-nbclient: Update to 0.10.0.

* gnu/packages/jupyter.scm (python-nbclient): Update to 0.10.0.
[native-inputs]: Remove python-setuptools and python-wheel; add
python-hatchling, python-flaky, python-pytest, python-pytest-asyncio,
python-pytest-cov, python-testpath, and python-xmltodict.

Change-Id: I15a87323456c6b4eaa8361972bcb6ae3686ec687

gnu: python-lsp-server: Update to 1.11.0.

* gnu/packages/python-xyz.scm (python-lsp-server): Update to 1.11.0.
[build-system]: Use pyproject-build-system.
[arguments]: Replace custom 'check phase with #:test-flags.
[propagated-inputs]: Remove python-autopep8, python-flake8, python-future, and
python-rope; add python-docstring-to-markdown, python-importlib-metadata, and
python-whatthepatch.
[native-inputs]: Add python-autopep8, python-flake8, python-rope,
python-setuptools, and python-wheel; remove python-mock and python-versioneer.

Change-Id: I64e5b3f9f9a92f720d006634fe24ca094c96ea60

gnu: python-lsp-jsonrpc: Update to 1.1.2.

* gnu/packages/python-xyz.scm (python-lsp-jsonrpc): Update to 1.1.2.
[build-system]: Use pyproject-build-system.
[native-inputs]: Remove python-mock; add python-coverage, python-pycodestyle,
python-pyflakes, python-pylint, python-pytest-cov, python-setuptools,
python-setuptools-scm, and python-wheel.

Change-Id: Ia8fb2c469d96727addfcf88a36fc51f0e6c0efac

gnu: python-rope: Update to 1.13.0.

* gnu/packages/python-xyz.scm (python-rope): Update to 1.13.0.
[build-system]: Use pyproject-build-system.
[arguments]: Remove to enable all tests.
[propagated-inputs]: Add python-pytoolconfig.
[native-inputs]: Add python-pre-commit, python-pytest-cov, python-setuptools,
and python-wheel.

Change-Id: I6a114d63cc6a59e292801095bef200cff60eeeff

gnu: python-platformdirs: Update to 4.2.1.

* gnu/packages/python-xyz.scm (python-platformdirs): Update to 4.2.1.
[native-inputs]: Add python-covdefaults and python-pytest-cov.

Change-Id: I8cd3e6cbe7a43f7a32566d263e571c0ea9920e17

gnu: Add python-whatthepatch.

* gnu/packages/python-xyz.scm (python-whatthepatch): New variable.

Change-Id: If087238003594c55f52d4467b6e7b494a52348f8