gnu: emacs-mmm-mode: Update to 0.5.11.

* gnu/packages/emacs-xyz.scm (emacs-mmm-mode): Update to 0.5.11.

Change-Id: Ia3216fb551570cc5d364759b48bafc94d0780b6d

gnu: emacs-auctex: Update to 14.0.3.

* gnu/packages/emacs-xyz.scm (emacs-auctex): Update to 14.0.3.

Change-Id: I028aa07669cc99265e8349d3d9b80dcc2acdb04c

gnu: emacs-hyperbole: Update to 9.0.0.

* gnu/packages/emacs-xyz.scm (emacs-hyperbole): Update to 9.0.0.

Change-Id: Ifd7946659e8cdcf0f6b2ade71fe343e79db0a73b

gnu: emacs-cider: Update to 1.13.1.

* gnu/packages/emacs-xyz.scm (emacs-cider): Update to 1.13.1.

Change-Id: Ic751ea2d479c41e271c0eb2730016eef897beec2

gnu: emacs-cape: Update to 1.3.

* gnu/packages/emacs-xyz.scm (emacs-cape): Update to 1.3.

Change-Id: I2267ba11037c027b0b77d83fe6718aab0dd8b52a

gnu: font-intel-one-mono: Split outputs for "out", "ttf" and "woff".

* gnu/packages/fonts.scm (font-intel-one-mono)[outputs]: New field.
[arguments]: Add 'split-outputs phase.

Change-Id: I0323fb55b9609c93c916b32fef4821533d580b48
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>

gnu: font-intel-one-mono: Update to 1.3.0.

* gnu/packages/fonts.scm (font-intel-one-mono): Update to 1.3.0.

Change-Id: I635100c90829de55d922b4e28a2f2524f44566dd
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>

gnu: Add libsixel.

* gnu/packages/image.scm (libsixel): New variable.

Curl is disabled to mitigate CVE-2021-45340 guix lint warns about.

Change-Id: I7c8077dd705409ce914ab347115d0b4fddeb37e1
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>

gnu: Add tagainijisho.

* gnu/packages/education.scm (tagainijisho): New variable.

Change-Id: I85834c9e91a743540ef751e0c2bb3138b4c3b762
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>

gnu: spice: Update to 0.15.2.

* gnu/packages/spice.scm (spice): Update to 0.15.2.

Change-Id: I0f79980dab53f5d65c1efa95e4221811247beaa3
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>

gnu: virglrenderer: Update to 1.0.1.

* gnu/packages/spice.scm (virglrenderer): Update to 1.0.1.
[source]: Update URI to avoid redirect.

Change-Id: I0b132a62b6cc312da857796ce5242a5b7ff475d6
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>

gnu: Add xfishtank.

* gnu/packages/toys.scm (xfishtank): New variable.

Reviewed-by: Greg Hogan <code@greghogan.com>
Reviewed-by: Steve George <steve@futurile.net>
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>

Change-Id: I490fba2d9ded274266d6376adf67c39bf5c9744a

gnu: Add xpenguins.

* gnu/packages/toys.scm (xpenguins): New variable.

Reviewed-by: Greg Hogan <code@greghogan.com>
Reviewed-by: Steve George <steve@futurile.net>
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>

Change-Id: I6262092da4d51abaca1d6f01ec2e3f27baca7a01

gnu: cwltool: Update to 3.1.20240112164112.

* gnu/packages/bioinformatics.scm (cwltool): Update to 3.1.20240112164112.
[arguments]: Use G-expressions. Set version in setup.py. Do not attempt to
substitute files cwltool/schemas/v1.1/tests/env-tool1.cwl,
cwltool/schemas/v1.1/tests/env-tool2.cwl and
cwltool/schemas/v1.1/tests/imported-hint.cwl that have been removed in this
release. Do not remove "-n auto" from pytest flags.
[inputs]: Add python-cwl-utils and python-spython.
[native-inputs]: Add python-pytest-xdist.

Change-Id: If1be7cdf39b767c5ef2a1dbddfdc95f59ea98cb6

Change-Id: I2ba81e8569abcf43cd0fad33daab1e4f8689e77f
Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>

gnu: Add python-spython.

* gnu/packages/linux.scm (python-spython): New variable.

Change-Id: I758f879608bc4b0c0411918b4ee0fa9cc3abc639
Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>

gnu: Add python-cwl-utils.

* gnu/packages/bioinformatics.scm (python-cwl-utils): New variable.

Change-Id: I9347c80c0e866b89a7d432091fbcf1bc009209a5
Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>

gnu: Add python-cwl-upgrader.

* gnu/packages/bioinformatics.scm (python-cwl-upgrader): New variable.

Change-Id: I2022239840e9fe9e745689ef8b8bf4279be2ff9e
Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>

gnu: Add python-cwlformat.

* gnu/packages/bioinformatics.scm (python-cwlformat): New variable.

Change-Id: Ib2d79e350ab100c61c7afe2d5d3eafc72146e493
Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>

gnu: python-schema-salad: Update to 8.5.20240102191335.

* gnu/packages/bioinformatics.scm (python-schema-salad): Update to
8.5.20240102191335.
[native-inputs]: Add python-pytest-xdist.
[propagated-inputs]: Add python-importlib-resources and
python-mypy-extensions. Remove python-lockfile, python-rdflib-jsonld and
python-typing-extensions. Replace python-mistune with python-mistune-next.
[arguments]: Use G-expressions. Set exact version number. Skip more tests that
require network access.

Change-Id: I4de4704f58f40fdf9bf4c02e41c2c353beaa3eb2
Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>

gnu: python-ruamel-yaml: Update to 0.18.6.

* gnu/package/serialization.scm (python-ruamel-yaml): Update to 0.18.6.
(python-ruamel.yaml-0.16): New variable.
* gnu/packages/package-management.scm (conda)[inputs]: Replace
python-ruamel.yaml with python-ruamel.yaml-0.16.
* gnu/packages/backup.scm (borgmatic)[inputs]: Replace python-ruamel.yaml with
python-ruamel.yaml-0.16.
* gnu/packages/python-xyz.scm (dynaconf)[inputs]: Replace python-ruamel.yaml
with python-ruamel.yaml-0.16.

Change-Id: Iff9eeeae043c9547d93a6c780f0c30bd760490d9

Change-Id: I43cad7e3936f62d209fbba7e86b93519cfc1c1ba
Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>