~ruther/guix-local

0728b45295c8961c73cfbb55cc370c1a41279a8e — Arun Isaac 2 years ago 65584b9b
gnu: Add python-cwlformat.

* gnu/packages/bioinformatics.scm (python-cwlformat): New variable.

Change-Id: Ib2d79e350ab100c61c7afe2d5d3eafc72146e493
Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
1 files changed, 27 insertions(+), 0 deletions(-)

M gnu/packages/bioinformatics.scm
M gnu/packages/bioinformatics.scm => gnu/packages/bioinformatics.scm +27 -0
@@ 5131,6 5131,33 @@ resources for bioinformatics.")
doublets in single-cell RNA-seq data.")
    (license license:expat)))

(define-public python-cwlformat
  (package
    (name "python-cwlformat")
    (version "2022.02.18")
    (source
     ;; The PyPI tarball is missing Readme.md. Readme.md is required for the
     ;; build.
     (origin
       (method git-fetch)
       (uri (git-reference
             (url "https://github.com/rabix/cwl-format")
             (commit version)))
       (file-name (git-file-name name version))
       (sha256
        (base32
         "0agkz2w86k91rc9m5vx5hsqi5nm6fcmzkng6j99hjapz0r9233ql"))))
    (build-system pyproject-build-system)
    (propagated-inputs
     (list python-importlib-resources
           python-ruamel.yaml))
    (home-page "https://github.com/rabix/cwl-format")
    (synopsis "Prettifier for CWL code")
    (description "@code{python-cwlformat} is a specification and a reference
implementation for a very opinionated @acronym{CWL, Common Workflow Language}
code formatter.  It outputs CWL in a standardized YAML format.")
    (license license:asl2.0)))

(define-public cwltool
  (package
    (name "cwltool")