gnu: hdf5: Build the C++ interface. * gnu/packages/maths.scm (hdf5)[arguments]: Add #:configure-flags.
gnu: Remove redundancy where mkdir-p <dir> is followed by install-file <file> <dir>. * gnu/packages/bioinformatics.scm (bwa)[arguments]: Remove redundant mkdir-p. (eigensoft)[arguments]: Likewise. (snap-aligner)[arguments]: Likewise. (pardre)[arguments]: Likewise. (piranha)[arguments]: Likewise. * gnu/packages/maths.scm (hypre)[arguments]: Likewise. * gnu/packages/mp3.scm (mpc123)[arguments]: Likewise. * gnu/packages/music.scm (tuxguitar)[arguments]: Likewise. * gnu/packages/pdf.scm (impressive)[arguments]: Likewise. * gnu/packages/qemu.scm (qemu)[arguments]: Likewise. Signed-off-by: Leo Famulari <leo@famulari.name>
gnu: octave: Update to 4.2.0. * gnu/packages/maths.scm (octave): Update to 4.2.0. [native-inputs]: Add lzip. [home-page]: Use https.
Merge branch 'core-updates'
gnu: gmsh: Update to 2.14.1 * gnu/packages/maths.scm (gmsh): Update to 2.14.1. [source]: Use new uri. Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
Merge branch 'master' into core-updates
gnu: maxima: Update to 5.38.1. * gnu/packages/maths.scm (maxima): Update to 5.38.1.
Merge branch 'master' into core-updates
gnu: mumps: Upgrade to 5.0.2. * gnu/packages/maths.scm (mumps): Upgrade to 5.0.2. [arguments]: Properly return boolean from install phase.
Merge branch 'master' into core-updates
gnu: r-rcpparmadillo: Update to 0.7.500.0.0. * gnu/packages/maths.scm (armadillo-for-rcpparmadillo): Update to 7.500.0. * gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.7.500.0.0.
gnu: armadillo: Update to 7.500.0. * gnu/packages/maths.scm (armadillo): Update to 7.500.0.
gnu: coda: Remove bundled libraries. * gnu/packages/maths.scm (coda): Remove bundled libraries. [source]: Add patch and snippet to remove bundled zlib, pcre and expat. [inputs]: Add system zlib, pcre and expat. * gnu/packages/patches/coda-use-system-libs.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
gnu: Add coda. * gnu/packages/maths.scm (coda): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
gnu: Add hdf-eos2. * gnu/packages/maths.scm (hdf-eos2): New variable. * gnu/packages/patches/hdf-eos2-build-shared.patch: New file. * gnu/packages/patches/hdf-eos2-remove-gctp.patch: New file. * gnu/packages/patches/hdf-eos2-fortrantests.patch: New file. * gnu/local.mk (dist_patch_DATA): Add patches. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
Merge branch 'master' into core-updates
gnu: hdf4: Really fix non-x86 architectures. This is a follow-up to commit 60da9fb1100787c49ed4910eacf50e83c6462dcc. * gnu/local.mk (dist_patch_DATA): Register patch. * gnu/packages/maths.scm (hdf4)[source]: Add patch.
Merge branch 'master' into core-updates
gnu: Add hdf4 * gnu/packages/maths.scm (hdf4, hdf4-alt): New variables. * gnu/packages/patches/hdf4-reproducibility.patch: New file. * gnu/packages/patches/hdf4-shared-fortran.patch: New file. * gnu/local.mk (dist_patch_DATA): Add patches. Co-Authored-By: Jeremy Robst <jpro@bas.ac.uk> Signed-off-by: Ludovic Courtès <ludo@gnu.org>
Merge branch 'master' into core-updates