gnu: python-traittypes: Simplify package. * gnu/packages/python-science.scm (python-traittypes) [build-system]: Swap to pyproject-build-system. [arguments]: Move excluded tests to <#:test-flags>. Use standard 'check phase. Change-Id: I4cab0c94036a7e5f0851edf2833dfac2f675d2a0
gnu: python-pynrrd: Update to 1.0.0. * gnu/packages/python-science.scm (python-pynrrd): Update to 1.0.0. [arguments]: Keep 'ensure-no-mtimes-pre-1980 phase as it's building with it successfully. [propagated-inputs]: Add python-nptyping and python-typing-extensions. Change-Id: Ic4dcd0825e71d3eb4acd39694bee9e22e8485f9f
gnu: python-pynrrd: Improve description. * gnu/packages/python-science.scm (python-pynrrd) [description]: Add definition of NRRD. Change-Id: I0335df0eb4be600d81799da64374ddfb49b06720
gnu: Add python-pynrrd. * gnu/packages/python-science.scm (python-pynrrd): New variable. Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
gnu: Add python-pandarallel. * gnu/packages/python-science.scm (python-pandarallel): New variable. Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
gnu: python-scipy: Enable building on more architectures. * gnu/packages/python-science.scm (python-scipy)[propagated-inputs]: Only include python-jupytext on systems where it is supported. Change-Id: Ic085094e4e3977e4c0698e8c03de09ee8e70f144
gnu: Add python-pyjanitor. * gnu/packages/python-science.scm (python-pyjanitor): New variable. Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
gnu: Add python-unyt. * gnu/packages/python-science.scm (python-unyt): New variable. Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
gnu: python-pyamg: Regenerate bundled files. * gnu/packages/python-science.scm (python-pyamg) [source]: Delete auto-generated files. [arguments] <#:phases>: Add 'amg-core-bind-them phase to re-generate *_bind.cpp files deleted in snippet. [native-inputs]: Add python-cppheaderparser and python-pyyaml. [description]: Improve style, omit implementation details. Change-Id: I6f68914cd912e6f4592e51c21b129847e73be847
gnu: python-trimesh: Enable tests. * gnu/packages/python-science.scm (python-trimesh): Enable tests and apply new package style. [source]: Use git checkout which has working test suit. [arguments] <#:test-flags>: Disable tests requiring optional Python modules. [propagated-inputs]: Add python-chardet, python-colorlog python-httpx python-jsonschema python-lxml python-networkx python-pillow python-requests python-rtree python-scipy python-setuptools python-shapely python-sympy and python-xxhash. Change-Id: I1aa363053c2d736bc44b8f9071c637256cc2d952
gnu: python-trimesh: Update to 4.0.10. * gnu/packages/python-science.scm (python-trimesh): Update to 4.0.10. [build-system]: Swap to pyproject-build-system. Change-Id: I757b4c27db9969d42021434883a057debbbc83fd
gnu: python-xarray-einstats: Update to 0.7.0. * gnu/packages/python-science.scm (python-xarray-einstats): Update to 0.7.0. Change-Id: Iddd1fca8c37f05a928d20b90f9f95814f31435b2
gnu: python-pyts: Update to 0.13.0. * gnu/packages/python-science.scm (python-pyts): Update to 0.13.0. [build-system]: Use pyproject-build-system. [arguments]: Remove custom 'check phase; enable all tests. [propagated-inputs]: Remove python-matplotlib. Change-Id: Iafcc047d8bb14e1eef514fd92aa53f8fda38eab0
gnu: python-pydicom: Update to 2.4.4. * gnu/packages/python-science.scm (python-pydicom): Update to 2.4.4. Change-Id: I996115fb3bdf0bd61d2b2dcdb2500b31ce104597
gnu: python-pydicom: Simplify package style. * gnu/packages/python-science.scm (python-pydicom)[build-system]: Swap to pyproject-build-system. [description]: Simplify wording, indent. Change-Id: I7ef413ea2da6cbb83eb33424c559f7ac5ed549cb
gnu: python-pynetdicom: Simplify package style. * gnu/package/python-science.scm (python-pynetdicom)[build-system]: Swap to pyproject-build-system. [description]: Simplify wording, indent. Change-Id: If4e80d06edb0080685d0695f30abc2f9db669f45
gnu: Add python-pynetdicom. * gnu/packages/python-science.scm (python-pynetdicom): New variable. Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
gnu: python-scipy: Update to 1.12.0. * gnu/packages/python-science.scm (python-scipy): Update to 1.12.0. [propagated-inputs]: Add python-jupytext, python-mpmath, python-mypy, python-numpydoc, python-pydata-sphinx-theme, python-pydevtool, python-rich-click, python-sphinx, python-threadpoolctl, and python-typing-extensions; remove python-pyparsing. [native-inputs]: Add python-hypothesis, python-pycodestyle, python-pytest-cov, and python-pytest-xdist; remove python-threadpoolctl. Change-Id: I81a4831e3d94c58416f7d35ec47de90370b88210
gnu: python-tdda: Remove relax-requirements phase. * gnu/packages/python-science.scm (python-tdda)[arguments]<#:phases>: Remove relax-requirements phase. Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
gnu: python-scikit-fem: Update to 9.0.1. * gnu/packages/python-science.scm (python-scikit-fem): Update to 9.0.1. [arguments]<#:test-flags>: Drop it to activate all tests. [native-inputs]: Add python-autograd, python-pyamg, and python-shapely. Change-Id: Ic4706196026bd5756b4db8230b15efacdca7d463