~ruther/guix-local

ref: 1f7ffd6ff7eef41fb1bc29fb23a70c5feb6ea2c5 guix-local/gnu/packages/bioinformatics.scm -rw-r--r-- 118.3 KiB
d9c44e9c — Ben Woodcroft 10 years ago 
gnu: diamond: Restrict supported systems to x86_64-linux.

* gnu/packages/bioinformatics.scm (diamond) [supported-systems]: Restrict to
  x86_64-linux.
db94f8c7 — Ricardo Wurmus 10 years ago 
gnu: bwa: Disable on non-x86_64.

* gnu/packages/bioinformatics.scm (bwa)[supported-systems]: Add field.
319fe79d — Mark H Weaver 10 years ago 
Merge branch 'master' into core-updates
6f04e515 — Ben Woodcroft 10 years ago 
gnu: vsearch: Restrict supported systems to x86_64-linux.

* gnu/packages/bioinformatics.scm (vsearch)[supported-systems]: Restrict
  to x86_64-linux.

Signed-off-by: Andreas Enge <andreas@enge.fr>
9ab5ea44 — Mark H Weaver 10 years ago 
gnu: clipper: Add 'file-name' field to source origin.

* gnu/packages/bioinformatics.scm (clipper)[source]: Add file-name.
a2950fa4 — Ben Woodcroft 10 years ago 
gnu: Add vsearch.

* gnu/packages/bioinformatics.scm (vsearch): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
b2bddb07 — Pjotr Prins 10 years ago 
gnu: Add bio-blastxmlparser.

* gnu/packages/bioinformatics.scm (bio-blastxmlparser): New variable.
e1556533 — Ludovic Courtès 10 years ago 
Merge branch 'core-updates'
d708b7a9 — Ben Woodcroft 10 years ago 
gnu: Add seqmagick.

* gnu/packages/bioinformatics.scm (seqmagick): New variable.
bd90127a — Mark H Weaver 10 years ago 
Merge branch 'master' into core-updates
a5002ae7 — Andreas Enge 10 years ago 
gnu: Add R/qtl.

* gnu/packages/bioinformatics.scm (r-qtl): New variable.

Co-authored-by: Pjotr Prins <pjotr.guix@thebird.nl>
edb15985 — Pjotr Prins 10 years ago 
gnu: Add bioruby.

* gnu/packages/bioinformatics.scm (bioruby): New variable.
41ddebdd — Ben Woodcroft 10 years ago 
gnu: Add mafft.

* gnu/packages/bioinformatics.scm (mafft): New variable.
9c38b540 — Pjotr Prins 10 years ago 
gnu: Add bio-locus.

* gnu/packages/bioinformatics.scm (bio-locus): New variable.
801a0a22 — David Thompson 10 years ago 
Revert "gnu: Add bio-locus."

This reverts commit b429c4fbb06299ce10ecc113a7818bf777c63a6e.
b429c4fb — Pjotr Prins 10 years ago 
gnu: Add bio-locus.

* gnu/packages/bioinformatics.scm (bio-locus): New variable.
75710da6 — Ludovic Courtès 10 years ago 
Merge branch 'master' into core-updates
1921b1de — Ricardo Wurmus 10 years ago 
gnu: Add deeptools.

* gnu/packages/bioinformatics.scm (deeptools): New variable.
96c46210 — Ludovic Courtès 10 years ago 
gnu: Use 'install-file' instead of 'mkdir-p' and 'copy-file' in obvious cases.

* gnu/packages/bioinformatics.scm (bedtools, bowtie, bwa, hisat, samtools,
  plink, star): Use 'install-file' instead of 'mkdir-p' + 'copy-file'.
* gnu/packages/check.scm (catch-framework): Likewise.
* gnu/packages/code.scm (global): Likewise.
* gnu/packages/emacs.scm (magit-svn, haskell-mode, emacs-pdf-tools):
  Likewise.
* gnu/packages/engineering.scm (fastcap, fasthenry): Likewise.
* gnu/packages/gnuzilla.scm (nss): Likewise.
* gnu/packages/guile.scm (guile-minikanren): Likewise.
* gnu/packages/java.scm (swt): Likewise.
* gnu/packages/make-bootstrap.scm (%static-binaries): Likewise.
* gnu/packages/maths.scm (lpsolve): Likewise.
* gnu/packages/mp3.scm (mpc123): Likewise.
* gnu/packages/ninja.scm (ninja): Likewise.
* gnu/packages/python.scm (python-numpy, python-pyparsing): Likewise.
* gnu/packages/screen.scm (dtach): Likewise.
* gnu/packages/synergy.scm (synergy): Likewise.
* gnu/packages/textutils.scm (utf8proc): Likewise.
* gnu/packages/version-control.scm (git-test-sequence): Likewise.
* gnu/packages/wicd.scm (wicd): Likewise.
f7283db3 — Ricardo Wurmus 10 years ago 
gnu: Add BioPerl.

* gnu/packages/bioinformatics.scm (bioperl-minimal): New variable.
Next