~ruther/guix-local: desktop-services

e160aa1f — Ricardo Wurmus 8 years ago

gnu: Add r-gage.

* gnu/packages/bioinformatics.scm (r-gage): New variable.

3121814e — Ricardo Wurmus 8 years ago

gnu: Add r-keggrest.

* gnu/packages/bioinformatics.scm (r-keggrest): New variable.

a9540107 — Ricardo Wurmus 8 years ago

gnu: antlr3-3.3: Prettify build phases.

* gnu/packages/java.scm (antlr3-3.3)[arguments]: Prettify build phases
"bin-install" and "generate-grammar".

9ecc4c69 — Ricardo Wurmus 8 years ago

gnu: r-servr: Update to 0.8.

* gnu/packages/web.scm (r-servr): Update to 0.8.

60ec9da3 — Ricardo Wurmus 8 years ago

gnu: r-tidyselect: Update to 0.2.3.

* gnu/packages/statistics.scm (r-tidyselect): Update to 0.2.3.

baa00ee9 — Ricardo Wurmus 8 years ago

gnu: r-msnbase: Update to 2.4.0.

* gnu/packages/bioinformatics.scm (r-msnbase): Update to 2.4.0.
[propagated-inputs]: Add r-lattice; remove r-reshape2.

39d9098d — Ricardo Wurmus 8 years ago

gnu: r-mutationalpatterns: Update to 1.4.0.

* gnu/packages/bioinformatics.scm (r-mutationalpatterns): Update to 1.4.0.
[propagated-inputs]: Add r-cowplot, r-ggdendro, and r-s4vectors.

14b3c719 — Ricardo Wurmus 8 years ago

gnu: r-annotationhub: Update to 2.10.0.

* gnu/packages/bioinformatics.scm (r-annotationhub): Update to 2.10.0.
[propagated-inputs]: Add r-curl.

15ca1959 — Ricardo Wurmus 8 years ago

gnu: r-mzr: Remove bundled copy of boost.

* gnu/packages/bioinformatics.scm (r-mzr)[source]: Remove boost source.
[arguments]: Add build phase "use-system-boost" to link with our boost
package and avoid building the bundled sources.

34b96754 — Ricardo Wurmus 8 years ago

gnu: r-mzr: Update to 2.12.0.

* gnu/packages/bioinformatics.scm (r-mzr): Update to 2.12.0.

b500dbcd — Ricardo Wurmus 8 years ago

gnu: r-mzid: Update to 1.16.0.

* gnu/packages/bioinformatics.scm (r-mzid): Update to 1.16.0.

eeaa6967 — Ricardo Wurmus 8 years ago

gnu: r-chipseq: Update to 1.28.0.

* gnu/packages/bioinformatics.scm (r-chipseq): Update to 1.28.0.
[propagated-inputs]: Add r-lattice.

158b6743 — Ricardo Wurmus 8 years ago

gnu: r-genomicfeatures: Update to 1.30.0.

* gnu/packages/bioinformatics.scm (r-genomicfeatures): Update to 1.30.0.
[propagated-inputs]: Add r-rmysql.

74248d22 — Ricardo Wurmus 8 years ago

gnu: Add r-rmysql.

* gnu/packages/databases.scm (r-rmysql): New variable.

4dd469ef — Ricardo Wurmus 8 years ago

gnu: r-rtracklayer: Update to 1.38.0.

* gnu/packages/bioinformatics.scm (r-rtracklayer): Update to 1.38.0.
[arguments]: Adjust patch to use system zlib.

a044c7f4 — Ricardo Wurmus 8 years ago

gnu: r-biocparallel: Update to 1.12.0.

* gnu/packages/bioinformatics.scm (r-biocparallel): Update to 1.12.0.
[propagated-inputs]: Add r-bh.

42e11d33 — Ricardo Wurmus 8 years ago

gnu: r-biomart: Update to 2.34.0.

* gnu/packages/bioinformatics.scm (r-biomart): Update to 2.34.0.
[propagated-inputs]: Add r-progress and r-stringr.

010ab2ff — Ricardo Wurmus 8 years ago

gnu: r-edger: Update to 3.20.1.

* gnu/packages/bioinformatics.scm (r-edger): Update to 3.20.1.
[propagated-inputs]: Add r-rcpp.

eb3f5cc7 — Ricardo Wurmus 8 years ago

gnu: r-gostats: Update to 2.44.0.

* gnu/packages/bioinformatics.scm (r-gostats): Update to 2.44.0.
[propagated-inputs]: Add r-rgraphviz.

2404cc42 — Ricardo Wurmus 8 years ago

gnu: r-category: Update to 2.44.0.

* gnu/packages/bioinformatics.scm (r-category): Update to 2.44.0.
[propagated-inputs]: Remove r-rsqlite; add r-dbi.