~ruther/guix-local

df25b004 — Ricardo Wurmus 10 years ago 
gnu: r-formatr: Update to 1.4.

* gnu/packages/statistics.scm (r-formatr): Update to 1.4.
84e53687 — Ricardo Wurmus 10 years ago 
gnu: r-evaluate: Update to 0.9.

* gnu/packages/statistics.scm (r-evaluate): Update to 0.9.
9a0ccf43 — Ricardo Wurmus 10 years ago 
gnu: r-bh: Update to 1.60.0-2.

* gnu/packages/statistics.scm (r-bh): Update to 1.60.0-2.
a76b3f69 — Ricardo Wurmus 10 years ago 
gnu: r-dbi: Update to 0.4-1.

* gnu/packages/statistics.scm (r-dbi): Update to 0.4-1.
eb1a5b65 — Ricardo Wurmus 10 years ago 
gnu: r-rcpp: Update to 0.12.5.

* gnu/packages/statistics.scm (r-rcpp): Update to 0.12.5.
8ede249e — Ricardo Wurmus 10 years ago 
gnu: r-genomicfeatures: Update to 1.24.2.

* gnu/packages/bioinformatics.scm (r-genomicfeatures): Update to 1.24.2.
192e1ea8 — Ricardo Wurmus 10 years ago 
gnu: r-summarizedexperiment: Update to 1.2.2.

* gnu/packages/bioinformatics.scm (r-summarizedexperiment): Update to 1.2.2.
d7420566 — Ricardo Wurmus 10 years ago 
gnu: r-biocparallel: Update to 1.6.2.

* gnu/packages/bioinformatics.scm (r-biocparallel): Update to 1.6.2.
73af676f — Ricardo Wurmus 10 years ago 
gnu: r-annotationdbi: Update to 1.34.2.

* gnu/packages/bioinformatics.scm (r-annotationdbi): Update to 1.34.2.
679e670b — Ricardo Wurmus 10 years ago 
gnu: r-variantannotation: Update to 1.18.1.

* gnu/packages/bioinformatics.scm (r-variantannotation): Update to 1.18.1.
186ed873 — Ricardo Wurmus 10 years ago 
gnu: r-genomeinfodb: Update to 1.8.1.

* gnu/packages/bioinformatics.scm (r-genomeinfodb): Update to 1.8.1.
0fc4a8af — Leo Famulari 10 years ago 
gnu: btrfs-progs: Update to 4.5.3.

* gnu/packages/linux.scm (btrfs-progs): Update to 4.5.3.
0e40755d — Jelle Licht 10 years ago 
gnu: jemalloc: Update to 4.2.0.

* gnu/packages/jemalloc.scm (jemalloc): Update to 4.2.0.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
119b8398 — Leo Famulari 10 years ago 
gnu: expat: Fix CVE-2016-0718. Improve fix for CVE-2015-1283.

* gnu/packages/patches/expat-CVE-2015-1283-refix.patch,
gnu/packages/patches/expat-CVE-2016-0718.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/xml.scm (expat)[replacement]: New field.
(expat/fixed): New variable.
[source]: Use new patches.
9684e30b — Ludovic Courtès 10 years ago 
gnu: flann: Do not install .a files.

* gnu/packages/maths.scm (flann)[arguments]: Add #:phases.
45848023 — Hartmut Goebel 10 years ago 
gnu: python: Add 'python' variables for different major/minor versions.

* gnu/packages/python.scm (python-2): Rename variable to...
  (python-2.7): ...this.
  (python-2): Refer to "python-2.7".
  (python): Rename variable to...
  (python-3.4): ...this.
  (python-3): Refer to "python-3.4".
  (python): Refer to "python-3".

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
39b30337 — Ludovic Courtès 10 years ago 
gnu: flann: Strip .mex file.

* gnu/packages/maths.scm (flann)[arguments]: Add #:strip-directories.
0947698c — Ben Woodcroft 10 years ago 
gnu: Add r-biased-urn.

* gnu/packages/statistics.scm (r-biased-urn): New variable.
44c5f025 — Efraim Flashner 10 years ago 
gnu: giflib: Use 'modify-phases'.

* gnu/packages/image.scm (giflib)[arguments]: Use 'modify-phases'.
3fdb2a84 — Efraim Flashner 10 years ago 
gnu: giflib: Update to 5.1.4 [fixes CVE-2015-7555, CVE-2016-3977].

* gnu/packages/image.scm (giflib): Update to 5.1.4.
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