gnu: python-hicmatrix: Update to 17.2. * gnu/packages/bioinformatics.scm (python-hicmatrix): Update to 17.2. [arguments] <test-flags>: Skip one test. <phases>: Remove 'find-blosc2. [inputs]: Remove c-blosc2. [native-inputs]: Remove python-wheel. Change-Id: I45972befc224d9c85858d1c1ac9be885f63cdf01 Signed-off-by: Rutherther <rutherther@ditigal.xyz>
gnu: pigx-scrnaseq: Use python-numpy@1. * gnu/packages/bioinformatics.scm (pigx-scrnaseq): [inputs]: Remove python-numpy; add python-numpy-1. Change-Id: I3bd24084626d2c1720c899a2bae6e9be4ab99c09 Signed-off-by: Rutherther <rutherther@ditigal.xyz>
gnu: python-sbpy: Skip one doc test. * gnu/packages/astronomy.scm (python-sbpy) [arguments] <test-flags>: Skip one test. Change-Id: Ie3c929d9367f596561f67e34f7bebf9024641654 Signed-off-by: Rutherther <rutherther@ditigal.xyz>
gnu: scvelo: Update to 0.3.3. * gnu/packages/bioinformatics.scm (scvelo): Update to 0.3.3. [source]: Switch to git-fetch. [arguments] <test-flags>: Run all tests in "tests/core" <phases>: Remove 'matplotlib-compatibility; add 'set-version. Change-Id: Iea4f9e9b7d385033b1131644c0145a5fdc3a7db7 Signed-off-by: Rutherther <rutherther@ditigal.xyz>
gnu: python-hic2cool: Fix tests. * gnu/packages/bioinformatics.scm (python-hic2cool) [arguments] <test-backend, test-flags>: Use custom. Change-Id: I1bfacc5b91a31e3bcd9434589d1d9e1a7b4d4076 Signed-off-by: Rutherther <rutherther@ditigal.xyz>
gnu: python-hdf5storage: Use pythno-numpy@1. * gnu/packages/python-xyz.scm (python-hdf5storage): [propagated-inputs]: Remove python-numpy; add python-numpy-1. [native-inputs]: Remove python-wheel. Change-Id: I1d2e3d4d5b654e4025aa16f4d1aa9230c10a3e0a Signed-off-by: Rutherther <rutherther@ditigal.xyz>
gnu: python-dcor: Use python-numpy@1. * gnu/packages/statistics.scm (python-dcor): [propagated-inputs]: Remove python-numpy; add python-numpy-1. Change-Id: Ida842dda2adea1e6a2085ae219b7e95988c14f85 Signed-off-by: Rutherther <rutherther@ditigal.xyz>
gnu: coda: Use python-numpy@1. * gnu/packages/maths.scm (coda): [native-inputs]: Remove python-numpy; add python-numpy-1. Change-Id: I1419ec3eb9cb4f25b1078908e305c99ec8bd59c4 Signed-off-by: Rutherther <rutherther@ditigal.xyz>
gnu: dolphin-emu: Use python-numpy@1. * gnu/packages/emulators.scm (dolphin-emu)[native-inputs]: Remove python-numpy, add python-numpy-1. Change-Id: I1693aa1af04d8c2abca4781b81143cb9a22275d8 Signed-off-by: Rutherther <rutherther@ditigal.xyz>
gnu: Add python-statannotations. * gnu/packages/statistics.scm (python-statannotations): New variable. Change-Id: Ib8a51d7b63c9be9af2addf193c8241569c793569 Signed-off-by: Rutherther <rutherther@ditigal.xyz>
gnu: python-scikit-surprise: Use python-numpy@1. * gnu/packages/python-science.scm (python-scikit-surprise): [propagated-inputs]: Remove python-numpy; add python-numpy-1. [native-inputs]: Remove python-wheel. Change-Id: I4ae8d087b602a04ff94ad1ef72c6ef0589938054 Signed-off-by: Rutherther <rutherther@ditigal.xyz>
gnu: python-spisea: Use python-numpy@1. * gnu/packages/astronomy.scm (python-spisea): [propagated-inputs]: Remove python-numpy; add python-numpy-1. Change-Id: Iab368ddefd7e73021e1377292afa9bfbd4ccba4d Signed-off-by: Rutherther <rutherther@ditigal.xyz>
gnu: python-pysynphot: Update to 2.0.0-1.a5e76c3. * gnu/packages/astronomy.scm (python-pysynphot): Update to a5e76c398f5b03192fa54659f81e7e1a929d9f7c commit. [propagated-inputs]: Remove python-numpy; add python-numpy-1. [native-inputs]: Remove python-wheel. Change-Id: Ic2f211ff766291665fdc40df7d06884d22093f0b Signed-off-by: Rutherther <rutherther@ditigal.xyz>
gnu: python-paramz Move to machinve-learning. * gnu/packages/python-science.scm (python-paramz): Move from here ... * gnu/packages/machine-learning.scm: ... to here. Change-Id: I128d863626a9b70bf31c37e200d40ad6ccd48ad2 Signed-off-by: Rutherther <rutherther@ditigal.xyz>
gnu: python-gpy: Use python-numpy@1. * gnu/packages/machine-learning.scm (python-gpy): [propagated-inputs]: Remove python-numpy; add python-numpy-1. Change-Id: Ie8740ce69188726c58b9a6ee753bdd3ac6b214a8 Signed-off-by: Rutherther <rutherther@ditigal.xyz>
gnu: python-paramz: Use python-numpy@1. * gnu/packages/python-science.scm (python-paramz): [propagated-inputs]: Remove python-numpy; add python-numpy-1. Change-Id: Ibc355d9a6e1ab635f63c21fe5e068a0ddfcc906a Signed-off-by: Rutherther <rutherther@ditigal.xyz>
gnu: rdkit: Use python-numpy@1. * gnu/packages/chemistry.scm (rdkit)[propagated-inputs]: Remove python-numpy; add python-numpy-1. Change-Id: Iab529bb547832bd56040cf4ea1cc414b14c37dd2 Signed-off-by: Rutherther <rutherther@ditigal.xyz>
gnu: boost-numpy: Use python-numpy@1. * gnu/packages/boost.scm (boost-numpy)[native-inputs]: Remove python-numpy; add python-numpy-1. Change-Id: I4ee9b625c69951099929873f2f7bbd7a7d0f6e29 Signed-off-by: Rutherther <rutherther@ditigal.xyz>
gnu: python-scikit-learn-1.6: Skip 3 more tests. * gnu/packages/machine-learning.scm (python-scikit-learn-1.6)[arguments] <test-flags>: Skip 3 more tests. Change-Id: I1c7e2eb7c18ddc5479cf45b84a6cf07d374842fe Signed-off-by: Rutherther <rutherther@ditigal.xyz>
gnu: python-vector: Update to 1.7.0. * gnu/packages/python-science.scm (python-vector): Update to 1.7.0. [propagated-inputs]: Add python-awkward, python-numba, and python-sympy. [native-inputs]: Remove python-awkward and python-sympy; add python-notebook, python-optree, and python-papermill. Change-Id: I760c26d69b5a5e4530e80d8e57af65db2fdf319f Signed-off-by: Rutherther <rutherther@ditigal.xyz>