gnu: borgmatic: Update to 1.7.12.

* gnu/packages/backup.scm (borgmatic): Update to 1.7.12.

Signed-off-by: Leo Famulari <leo@famulari.name>

gnu: stellarium: Update to 23.1 [fixes CVE-2023-28371].

Upstream introduced new versioning model <year>.<release>

* gnu/packages/astronomy.scm (stellarium): Update to 23.1.

Signed-off-by: Leo Famulari <leo@famulari.name>

gnu: calcmysky: Update to 0.3.0.

* gnu/packages/astronomy.scm (calcmysky): Update to 0.3.0.

Signed-off-by: Leo Famulari <leo@famulari.name>

gnu: gnutls: Extend test timeout on powerpc-linux.

* gnu/packages/tls.scm (gnutls)[arguments]: When building for
powerpc-linux add a phase to extend the test timeout.

gnu: ultrastar-deluxe: Build with ffmpeg-5.

* gnu/packages/games.scm (ultrastar-deluxe)[inputs]: Replace ffmpeg with
ffmpeg-5.

gnu: guix: Update to 1.4.0-5.286cdf0.

* gnu/packages/package-management.scm (guix): Update to 1.4.0-5.286cdf0.

tests: guix-system: Drop the i686-linux desktop image test.

Desktop these days means having Rust support (GNOME), which i686 currently
lacks on Guix.

* tests/guix-system.sh: Do not attempt to build the desktop.tmpl image for
i686-linux.

gnu: samba: Update to 4.18.1 [security fixes].

Fixes CVE-2023-0922 and CVE-2023-0614.

* gnu/packages/samba.scm (samba): Update to 4.18.1.

Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
Modified-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>

gnu: samba: Apply graft, and make graft private.

* gnu/packages/samba.scm (samba) [replacement]: Add field.
(samba/security-fixes): Renamed from samba/fixed, for clarity.
* gnu/packages/samba.scm (samba/pinned): Adjust for graft variable name change.

gnu: samba: Make the python-cryptography input conditional.

* gnu/packages/samba.scm (samba) [arguments]: Conditionally enable self tests
in configure phase.
[native-inputs]:  Conditionally add python-cryptography.
* gnu/packages/samba.scm (samba/pinned) [native-inputs]: Likewise.

Reported-by: John Kehayias <john.kehayias@protonmail.com>

tests: Fix texlive->guix-package test.

The home page for the package had changed.

* tests/texlive.scm ("texlive->guix-package"): Match the home-page and
synopsis inexactly to avoid future similar breakages.

gnu: python-pillow/security-fixes: Make graft package private.

This fixes the tests/packages.scm test suite, which would have failed its
'fold-available-packages with/without cache' test case due two python-pillow
packages having the same name/version.

* gnu/packages/python-xyz.scm (python-pillow/security-fixes): Make private.

tests: Re-add debug output to a package tests.

* tests/packages.scm ("fold-available-packages with/without cache"):
Re-introduce debugging output.

gnu: r-dmrseq: Update to 1.18.1.

* gnu/packages/bioconductor.scm (r-dmrseq): Update to 1.18.1.

gnu: r-beachmat: Update to 2.14.2.

* gnu/packages/bioconductor.scm (r-beachmat): Update to 2.14.2.

gnu: r-gdsfmt: Update to 1.34.1.

* gnu/packages/bioconductor.scm (r-gdsfmt): Update to 1.34.1.

gnu: r-ebimage: Update to 4.40.1.

* gnu/packages/bioconductor.scm (r-ebimage): Update to 4.40.1.

gnu: r-enrichplot: Update to 1.18.4.

* gnu/packages/bioconductor.scm (r-enrichplot): Update to 1.18.4.

gnu: r-structuralvariantannotation: Update to 1.14.1.

* gnu/packages/bioconductor.scm (r-structuralvariantannotation): Update to 1.14.1.

gnu: r-rhdf5: Update to 2.42.1.

* gnu/packages/bioconductor.scm (r-rhdf5): Update to 2.42.1.