~ruther/guix-local

adf5d0a0 — Roel Janssen 8 years ago 
gnu: r-delayedarray: Update to 0.2.7.

* gnu/packages/bioinformatics.scm (r-delayedarray): Update to 0.2.7.
f41150f1 — Roel Janssen 8 years ago 
gnu: r-summarizedexperiment: Update to 1.6.3.

* gnu/packages/bioinformatics.scm (r-summarizedexperiment): Update to 1.6.3.
26760c80 — Roel Janssen 8 years ago 
gnu: r-genomicalignments: Update to 1.12.1.

* gnu/packages/bioinformatics.scm (r-genomicalignments): Update to 1.12.1.
15afa9bf — Roel Janssen 8 years ago 
gnu: r-rtracklayer: Update to 1.36.4.

* gnu/packages/bioinformatics.scm (r-rtracklayer): Update to 1.36.4.
8cfaa9ab — Roel Janssen 8 years ago 
gnu: r-genomicfeatures: Update to 1.28.4.

* gnu/packages/bioinformatics.scm (r-genomicfeatures): Update to 1.28.4.
9eb27146 — Roel Janssen 8 years ago 
gnu: r-copywriter: Update to 2.8.1.

* gnu/packages/bioinformatics.scm (r-copywriter): Update to 2.8.1.
bfa0d1e7 — Roel Janssen 8 years ago 
gnu: r-sva: Update to 3.24.4.

* gnu/packages/bioinformatics.scm (r-sva): Update to 3.24.4.
8060a617 — Roel Janssen 8 years ago 
gnu: r-rsqlite: Update to 2.0.

* gnu/packages/statistics.scm (r-rsqlite): Update to 2.0.
796237a9 — Roel Janssen 8 years ago 
gnu: Add r-blob.

* gnu/packages/statistics.scm (r-blob): New variable.
aa184803 — Roel Janssen 8 years ago 
gnu: Add r-pkgconfig.

* gnu/packages/statistics.scm (r-pkgconfig): New variable.
c53fc481 — Ludovic Courtès 8 years ago 
pull: Honor '--no-grafts'.

* guix/scripts/pull.scm (guix-pull): Parameterize %GRAFT? as a function
of OPTS.
3085b502 — Ludovic Courtès 8 years ago 
pull: Use the commit ID as the version string.

* guix/scripts/pull.scm (build-from-source): Add #:commit parameter.
Pass it to BUILD.
(build-and-install): Add #:commit and pass it to 'build-from-source'.
(guix-pull): Pass #:commit to 'build-and-install'.
59a16275 — Ludovic Courtès 8 years ago 
pull: Fetch source code from Git.

* guix/scripts/pull.scm (%snapshot-url, with-environment-variable)
(with-PATH): Remove.
(ensure-guile-git!): New procedure.
(%repository-url): New variable.
(%default-options): Add 'repository-url' and 'ref'.
(show-help, %options): Add '--commit' and '--url'.
(temporary-directory, first-directory, interned-then-deleted)
(unpack): Remove.
(build-from-source): Rename 'tarball' to 'source'.  Remove call to
'unpack'.
(build-and-install): Rename 'tarball' to 'source'.
(honor-lets-encrypt-certificates!, report-git-error): New procedures.
(with-git-error-handling): New macro.
(guix-pull)[fetch-tarball]: Remove.
Wrap body in 'with-git-error-handling'.  Rewrite to use
'latest-repository-commit'.
* build-aux/build-self.scm (build): Print an error message and exit when
GUILE-GIT is #f.
* doc/guix.texi (Invoking guix pull): Mention Git.  Document '--commit'
and '--branch'.
7441f1db — Ludovic Courtès 8 years ago 
build: Make Guile-Git a hard requirement.

* configure.ac: Error out when (git) is missing.
* doc/guix.texi (Requirements): Mention Guile-Git.
* Makefile.am (MODULES): Add guix/git.scm unconditionally.
fc8f0631 — Marius Bakke 8 years ago 
gnu: re2: Update to 2017-08-01.

* gnu/packages/regex.scm (re2): Update to 2017-08-01.
1926fd2b — Marius Bakke 8 years ago 
gnu: maim: Update to 5.4.66.

* gnu/packages/xdisorg.scm (maim): Update to 5.4.66.
7d960db1 — Marius Bakke 8 years ago 
gnu: slop: Update to 7.3.48.

* gnu/packages/xdisorg.scm (slop): Update to 7.3.48.
b73e49f5 — Marius Bakke 8 years ago 
gnu: git: Update to 2.13.4.

* gnu/packages/version-control.scm (git): Update to 2.13.4.
14fce399 — Roel Janssen 8 years ago 
gnu: r-foreign: Update hash after upstream tarball change.

* gnu/packages/statistics.scm (r-foreign):  Update hash.  The only difference
  in the tarball is the metadata.  The contents are identical.
cdf124c6 — Roel Janssen 8 years ago 
gnu: r-foreign: Remove duplicate recipe.

* gnu/packages/statistics.scm (r-foreign): Remove duplicate recipe.
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