gnu: emacs-next-pgtk: Fix super key problem.

Recent version of emacs 29 with pgtk flag has a problem with handling super
key modifier, due to gtk bug: https://gitlab.gnome.org/GNOME/gtk/-/issues/4913
This commit workarounds it.

* gnu/packages/patches/emacs-pgtk-super-key-fix.patch: New file.
* gnu/packages/emacs.scm (emacs-next-pgtk): Use it here.
* gnu/local.mk (dist_patch_DATA): Register it here.

gnu: python-scipy: Update to 1.9.1.

* gnu/packages/python-science.scm (python-scipy): Update to 1.9.1.
[source]: Switch to GIT-FETCH.
[outputs]: Remove.
[arguments]: Don't disable Pythran.  Don't configure OpenBLAS which is now
discovered by pkg-config.  Do a "manual" PEP 517 style build.  Make
install-doc phase conditional on the presence of Sphinx.  Simplify tests.
[propagated-inputs]: Add PYTHON-PYTHRAN.
[native-inputs]: Remove PERL, WHICH, PYTHON-NUMPYDOC,
PYTHON-PYDATA-SPHINX-THEME, PYTHON-SPHINX, and PYTHON-SPHINX-PANELS.  Add
GCC, PKG-CONFIG, PYTHON-PYPA-BUILD and PYTHON-MESON.

gnu: Add meson-python.

* gnu/packages/build-tools.scm (meson-python): New variable.

gnu: antlr4: Update to 4.10.1.

* gnu/packages/java.scm (java-antlr4-runtime): Update to 4.10.1.
[source](patches): Remove obsolete patch.
(java-antlr4-runtime-cpp): Add #:configure-flags.
(antlr4)[arguments]: Don't run tests from removed directory.  Enable one test;
exclude one file.
* gnu/packages/fontutils.scm (python-afdko)[arguments]: Add phase to build
with the C++ 17 standard.

gnu: python-afdko: Update to 3.9.1.

* gnu/packages/fontutils.scm (python-afdko): Update to 3.9.1.
[arguments]: Add phase to build with system libxml2.  Substitute antlr4_static
in one more file.
[native-inputs]: Add PKG-CONFIG.
[inputs]: Add LIBXML2.

gnu: font-amiri: Update to 0.117.

* gnu/packages/fonts.scm (font-amiri): Update to 0.117.
[native-inputs]: Add PYTHON-GLYPHSETS.

gnu: python-ufo2ft: Update to 2.28.0.

* gnu/packages/fontutils.scm (python-ufo2ft): Update to 2.28.0.
[propagated-inputs]: Replace PYTHON-FONTTOOLS with PYTHON-FONTTOOLS-NEXT.
* gnu/packages/fonts.scm (font-amiri)[native-inputs]: Likewise, to prevent
shadowing the propagated FontTools.

gnu: psautohint: Build with python-fonttools-next.

* gnu/packages/fontutils.scm (psautohint)[propagated-inputs]: Replace
PYTHON-FONTTOOLS with PYTHON-FONTTOOLS-NEXT.

gnu: python-statmake: Build with python-fonttools-next.

* gnu/packages/fontutils.scm (python-statmake)[propagated-inputs]: Change from
PYTHON-FONTTOOLS to PYTHON-FONTTOOLS-NEXT.

gnu: python-fonttools-next: Update to 4.37.1.

* gnu/packages/python-xyz.scm (python-fonttools-next): Update to 4.37.1.
* gnu/packages/fontutils.scm (python-afdko)[source](snippet): Adjust expected
test output.

gnu: python-compreffor: Update to 0.5.2.

* gnu/packages/fontutils.scm (python-compreffor): Update to 0.5.2.

gnu: python-fontparts: Update to 0.10.8.

* gnu/packages/fontutils.scm (python-fontparts-bootstrap): Update to 0.10.8.

gnu: python-defcon: Update to 0.10.2.

* gnu/packages/fontutils.scm (python-defcon-bootstrap): Update to 0.10.2.

gnu: python-fontmath: Update to 0.9.2.

* gnu/packages/fontutils.scm (python-fontmath): Update to 0.9.2.

gnu: Add python-glyphsets.

* gnu/packages/fontutils.scm (python-glyphsets): New variable.

gnu: Add python-glyphslib.

* gnu/packages/fontutils.scm (python-glyphslib): New variable.

gnu: Add python-openstep-plist.

* gnu/packages/python-xyz.scm (python-openstep-plist): New variable.

gnu: python-afdko: Run tests in parallel.

* gnu/packages/fontutils.scm (python-afdko)[arguments]: Adjust check phase for
parallel execution.
[native-inputs]: Add PYTHON-PYTEST-XDIST.

gnu: nfs-utils: Remove unused input.

* gnu/packages/nfs.scm (nfs-utils)[inputs]: Remove LIBNFSIDMAP, which is part
of nfs-utils nowadays.

gnu: hitch: Update to 1.7.3.

* gnu/packages/web.scm (hitch): Update to 1.7.3.