~ruther/guix-local

62853330 — Ricardo Wurmus 1 year, 4 months ago
gnu: snakemake: Disable one more test.

* gnu/packages/python-xyz.scm (snakemake)[arguments]: Disable test_lint test.

Change-Id: I00d3e1e900c5d4dacb660d253a2a1839c7c7826a
ce8db958 — Ricardo Wurmus 1 year, 4 months ago
gnu: python-yte: Update to 1.7.0.

* gnu/packages/python-xyz.scm (python-yte): Update to 1.7.0.
[build-system]: Use pyproject-build-system.
[arguments]: Replace 'check phase.
[propagated-inputs]: Add python-dpath.
[native-inputs]: Add python-numpy, python-poetry-core, and python-pytest.

Change-Id: If1d4e8e0289d9a36205353ad2c9bb345076e4ff7
f7ac711d — Ricardo Wurmus 1 year, 4 months ago
gnu: python-dpath: Update to 2.2.0.

* gnu/packages/python-xyz.scm (python-dpath): Update to 2.2.0.
[build-system]: Use pyproject-build-system.
[arguments]: Remove custom 'check phase.
[native-inputs]: Remove python-mock and python-nose; add python-nose2,
python-setuptools, and python-wheel.

Change-Id: I30ca919712b03f868d3e9fed4802817e4602dcda
1dc317fb — Ricardo Wurmus 1 year, 4 months ago
gnu: snakemake-7: Update to 7.32.4.

* gnu/packages/python-xyz.scm (snakemake-7): Update to 7.32.4.
[arguments]: Use #:test-flags instead of a custom 'check phase; remove
'tabulate-compatibility phase; add 'pre-check phase.
[propagated-inputs]: Add python-humanfriendly, python-reretry, and
python-throttler; remove python-ratelimiter.

Change-Id: Iea7f17559b19098ca5a589d164355f3918f4bb3e
bcf4ab75 — Ricardo Wurmus 1 year, 4 months ago
gnu: python-toposort: Update to 1.10.

* gnu/packages/python-xyz.scm (python-toposort): Update to 1.10.
[build-system]: Use pyproject-build-system.
[arguments]: Replace 'check phase.
[native-inputs]: Add python-setuptools and python-wheel.

Change-Id: Ifde522ecba6331634c911856892c3b25098fbd88
9ebcce5a — Ricardo Wurmus 1 year, 4 months ago
gnu: Add python-reretry.

* gnu/packages/python-xyz.scm (python-reretry): New variable.

Change-Id: Ic54bdb5eee422b12d2c0e475abb6c4f142cad1e3
7af8a3ad — Ricardo Wurmus 1 year, 4 months ago
gnu: Add python-throttler.

* gnu/packages/python-xyz.scm (python-throttler): New variable.

Change-Id: I04a07281d4ba77d880d7c8176b1a3269713b9b63
158323fa — Sharlatan Hellseher 1 year, 4 months ago
gnu: zbar: Update to 0.23.93.

* gnu/packages/aidc.scm (zbar): Update to 0.23.93.

Change-Id: Id681057d67cfbd26d1b95a9450b2c9cace2545f6
d722e9ef — Sharlatan Hellseher 1 year, 4 months ago
gnu: python-glue-astronomy: Avoid deprecation failure in tests.

* gnu/packages/astronomy.scm (python-glue-astronomy) [arguments]
<test-flags>: Skip one failing test.

Change-Id: I4dd3d3e1d56b75cf8e6479bdeacf2c391d206e9c
bd5df72c — Sharlatan Hellseher 1 year, 4 months ago
gnu: python-sanic: Scip more tests, simplify.

* gnu/packages/python-web.scm (python-sanic) [arguments] <test-flags>:
Ignore all benchmark and typing tests. Skip more failing tests.
<phases>: Use default 'check.
[native-inputs]: Remove python-bandit, python-chardet, python-coverage,
python-cryptography, python-docutils, python-mypy, python-pygments,
python-pytest-benchmark, python-pytest-sanic, python-slotscheck,
python-towncrier, python-tox, and python-types-ujson; add
python-pytest-asyncio.

Change-Id: I8804114656fd76639939ba2fa50fb95d65b823ab
09ebf091 — Sharlatan Hellseher 1 year, 4 months ago
gnu: python-debug: Use G-Expressions.

* gnu/packages/python.scm (python-debug): Use G-Expressions, fix build.

Change-Id: I940ec4fddcea03a258659ca044b0dad4948c4ed5
907ae7b0 — Sharlatan Hellseher 1 year, 4 months ago
gnu: python-uvloop: Fix build.

* gnu/packages/python-web.scm (python-uvloop): Fix unquote-splicing
error as seen in <https://ci.guix.gnu.org/build/9605318/log/raw>.

Change-Id: I26bba8d29913e01e037c678d943607a7c00f5647
18e9141d — Sharlatan Hellseher 1 year, 4 months ago
gnu: python-uvloop: Fix indentation.

* gnu/packages/python-web.scm (python-uvloop): Fix indentation.

Change-Id: I72f6674c870317ebec48933e2bb5744bae6e0387
43bd9c7f — Sharlatan Hellseher 1 year, 4 months ago
gnu: python-asyncpg: Update to 0.30.0.

* gnu/packages/databases.scm (python-asyncpg): Update to 0.30.0. Fix build.
[build-system]: Swap to pyproject-build-system
[propagated-inputs]: Remove python-typing-extensions; add
python-async-timeout.
[native-inputs]: Add python-distro, python-setuptools, and python-wheel.

Change-Id: Icb586671370ac2f6d30577383b257003eda6a4d5
a5b50723 — Sharlatan Hellseher 1 year, 4 months ago
gnu: python-cftime: Fix tests.

* gnu/packages/python-xyz.scm (python-cftime) [arguments] <phases>:
Remove 'remove-unwanted-dev-dependencies, add ''remove-unwanted-pytest-options.
[native-inputs]: Remove python-sphinx.

Change-Id: Ib196a6a3781da4067d287f62f5f92b72eb024de3
de961c30 — Nicolas Graves 1 year, 5 months ago
gnu: Remove python-pytest-pep8.

This package is outdated.

* gnu/packages/check.scm (python-pytest-pep8): Delete variable.
(python-pytest-flakes)[native-inputs]: Remove python-pytest-pep8.
* gnu/packages/machine-learning.scm (python-keras,
python-keras-applications)[native-inputs]: Remove python-pytest-pep8.

Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
ae7d1154 — Nicolas Graves 1 year, 5 months ago
gnu: Remove python-pep8.

* gnu/packages/python-xyz.scm (python-pep8): Delete variable.
(python-cliapp, python-ttystatus)[native-inputs]: Remove python-pep8.
* gnu/packages/radio.scm (chirp)[native-inputs]: Remove python-pep8.

Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
a41f421b — Nicolas Graves 1 year, 4 months ago
gnu: python-unyt: Avoid deprecation failure in tests.

* gnu/packages/python-science.scm (python-unyt)[arguments]
{test-flags}: Ignore failing test.

Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
fcc266cf — Nicolas Graves 1 year, 4 months ago
gnu: python-h2: Fix test-flags.

* gnu/packages/python-web.scm (python-h2)[arguments]{test-flags}:
Fix quoting.

Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
24ad03da — Nicolas Graves 1 year, 5 months ago
gnu: python-anndata: Ignore failing test.

* gnu/packages/python-xyz.scm (python-anndata)[arguments]{test-flags}:
Ignore test_read_write_X test.
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