~ruther/guix-local

5701d131 — Ricardo Wurmus 2 years ago
gnu: r-powerlaw: Update to 0.80.0.

* gnu/packages/cran.scm (r-powerlaw): Update to 0.80.0.

Change-Id: I1b3c185ac4a8748698fe9218c262620b42f5f06d
854d1be7 — Ricardo Wurmus 2 years ago
gnu: r-httpuv: Update to 1.6.14.

* gnu/packages/cran.scm (r-httpuv): Update to 1.6.14.

Change-Id: I1f650010cce97020f7b563adfcd74d7e4dec4981
51ca6567 — Ricardo Wurmus 2 years ago
gnu: r-ga: Update to 3.2.4.

* gnu/packages/cran.scm (r-ga): Update to 3.2.4.

Change-Id: I698d5c3eda6598c435fcf37b5e7eaaf5c4e15e63
cd9e88c9 — Ricardo Wurmus 2 years ago
gnu: r-ggm: Update to 2.5.1.

* gnu/packages/bioconductor.scm (r-ggm): Update to 2.5.1.
[propagated-inputs]: Add r-biocmanager.

Change-Id: I8db7e517b96c3c42cb05246378b4190c9c954a47
1541c1bb — Ricardo Wurmus 2 years ago
gnu: r-rjava: Update to 1.0-11.

* gnu/packages/cran.scm (r-rjava): Update to 1.0-11.
[source]: Remove snippet.
[arguments]: Remove 'replace-bundled-minified-JavaScript phase.
[native-inputs]: Remove esbuild.

Change-Id: I008810b6919412023fc419d9cbadfea0fe2892bb
1bb0d635 — Ricardo Wurmus 2 years ago
gnu: r-catdata: Update to 1.2.4.

* gnu/packages/cran.scm (r-catdata): Update to 1.2.4.
[native-inputs]: Add r-knitr.

Change-Id: I7e2873a612f114d7124d5787ff70a8bf0ffefe93
c3e28925 — Ricardo Wurmus 2 years ago
gnu: r-r-devices: Update to 2.17.2.

* gnu/packages/cran.scm (r-r-devices): Update to 2.17.2.
[arguments]: Add 'set-HOME phase.
[native-inputs]: Add r-r-rsp.

Change-Id: Iaaead01e690e95971148ae063aa7af589969d39c
67c1a961 — Ricardo Wurmus 2 years ago
gnu: r-igraph: Update to 2.0.1.1.

* gnu/packages/cran.scm (r-igraph): Update to 2.0.1.1.
[properties]: Tell updater to keep extra native input "which".
[native-inputs]: Add pkg-config and which.

Change-Id: Id56c68784d192f7a3031a338fe63a4c17799c605
788657b6 — Ricardo Wurmus 2 years ago
gnu: r-antiword: Update to 1.3.3.

* gnu/packages/cran.scm (r-antiword): Update to 1.3.3.
[properties]: Tell updater not to remove "antiword" input.
[arguments]: Use G-expression.

Change-Id: Ifdbf80f546b0ab3abfc3b8002ba01b46c9105a1c
a4e75305 — Ricardo Wurmus 2 years ago
gnu: r-sapa: Patch call of dstebz routine.

* gnu/packages/patches/r-sapa-lapack.patch: New patch.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/cran.scm (r-sapa)[source]: Add it.

Change-Id: I17354c4e8b3a0f322e17c9a1e17bc37c93630105
a874d440 — Ricardo Wurmus 2 years ago
gnu: r-with-tests: Prevent compression of libraries.

Compression prevents Guix from detecting references.
This is a follow-up to commit ff0d34a29bc0f19b1dd2714fc0a3bd73a244aebe.

Reported-by: Jonas Freimuth.

* gnu/packages/statistics.scm (r-with-tests)[arguments]: Do not compress
included libraries like "parallel".

Change-Id: I278d19c1504d8ac33a1fc4a941467705a37d574d
afe677a6 — Ricardo Wurmus 2 years ago
gnu: r-minimal, r-with-tests: Use G-expressions.

* gnu/packages/statistics.scm (r-minimal, r-with-tests)[arguments]: Use
G-expressions.

Change-Id: I241297444cdb261dfc9901efd73c436a7ccf0acf
9f1ab898 — Efraim Flashner 2 years ago
gnu: python-scipy: Enable building on more architectures.

* gnu/packages/python-science.scm (python-scipy)[propagated-inputs]:
Only include python-jupytext on systems where it is supported.

Change-Id: Ic085094e4e3977e4c0698e8c03de09ee8e70f144
7bf98da9 — Efraim Flashner 2 years ago
gnu: libhdate: Fix pkg-config file.

* gnu/packages/calendar.scm (libhdate)[source]: Add snippet to adjust
the pkg-config file to have the correct prefix.

Change-Id: I5273f732a4e4e512057aa8bc1ecd40a81ec7828e
144c9503 — Ian Eure 2 years ago
gnu: emacspeak: Update to 59.0.

* gnu/packages/emacs-xyz.scm (emacspeak): Update to 59.0.
[source]: Switch to git-fetch.

Change-Id: I80e93286fa0de931e85f07c22e050faeaf8d0280
Signed-off-by: Clément Lassieur <clement@lassieur.org>
cdadef64 — Kiran Shila 3 years ago
gnu: Add python-hdbscan.

* gnu/packages/machine-learning.scm (python-hdbscan): New variable.

Co-authored-by: Sharlatan Hellseher <sharlatanus@gmail.com>
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
Change-Id: I13a78dd795490e6d4a8486741e2d5281605b7bb9
cde0adaa — Troy Figiel 2 years ago
gnu: Add python-pyjanitor.

* gnu/packages/python-science.scm (python-pyjanitor): New variable.

Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
343f4f1d — Troy Figiel 2 years ago
gnu: Add python-unyt.

* gnu/packages/python-science.scm (python-unyt): New variable.

Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
370b79b4 — David Thompson 2 years ago
gnu: guile-next: Update to commit fb1f5e2.

* gnu/packages/guile.scm (guile-next): Update to commit fb1f5e2.

Change-Id: Ia699bf7bf950b8780366146508eec566a738fb80
21e4d6cd — Maxim Cournoyer 2 years ago
gnu: mumi: Update to 0.0.8.

* gnu/packages/mail.scm (mumi): Update to 0.0.8.

Change-Id: I0342f3cfb1b257d7beb25a5d9d0732895f88ec35
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