~ruther/guix-local

4bb0b4cc — Ricardo Wurmus 8 years ago 
gnu: Add r-bindrcpp.

* gnu/packages/cran.scm (r-bindrcpp): New variable.
eed58a08 — Ricardo Wurmus 8 years ago 
gnu: Add r-bindr.

* gnu/packages/cran.scm (r-bindr): New variable.
a8cba9dd — Ricardo Wurmus 8 years ago 
gnu: r-rcpp: Move to (gnu packages cran).

* gnu/packages/statistics.scm (r-rcpp): Move from here...
* gnu/packages/cran.scm (r-rcpp): ...to here.
736332c7 — Ricardo Wurmus 8 years ago 
gnu: r-rcpp: Update to 0.12.12.

* gnu/packages/statistics.scm (r-rcpp): Update to 0.12.12.
847b4572 — Ricardo Wurmus 8 years ago 
gnu: r-plogr: Move to (gnu packages cran).

* gnu/packages/statistics.scm (r-plogr): Move from here...
* gnu/packages/cran.scm (r-plogr): ...to here.
5bee6bf4 — Ricardo Wurmus 8 years ago 
gnu: Add r-glue.

* gnu/packages/cran.scm (r-glue): New variable.
dd4b7476 — Danny Milosavljevic 8 years ago 
gnu: Add grub-hybrid.

* gnu/packages/bootloaders.scm (grub-hybrid): New variable.
75e6639f — Ben Woodcroft 8 years ago 
gnu: htseq: Use PyPI URI.

This is a follow-up to 92971d68ac942cd4a38092b4ccb20a8192a56aaf.

* gnu/packages/bioinformatics.scm (htseq)[source]: Use 'pypi-uri'.
92971d68 — Ben Woodcroft 8 years ago 
gnu: htseq: Update to 0.9.1.

* gnu/packages/bioinformatics.scm (htseq): Update to 0.9.1.
[arguments]: Use python-3 by removing field.
[native-inputs]: Add 'python-cython'.
[propagated-inputs]: Use python3 numpy package.
[inputs]: Use python3 pysam package.  Add 'python-matplotlib'.
(python2-htseq): New variable.
(clipper)[inputs]: Use it.
a8ead6f9 — Efraim Flashner 8 years ago 
gnu: vc: Limit to x86_64 and i686.

* gnu/packages/maths.scm (vc)[supported-systems]: New field.
5638d715 — Manolis Ragkousis 8 years ago 
gnu: openscenegraph: Add 'Release' configure flag.

* gnu/packages/graphics.scm (openscenegraph)[arguments]: Add "-DCMAKE_BUILD_TYPE=Release".
68a29ab8 — Eric Bavier 8 years ago 
gnu: Add LeoCAD.

* gnu/packages/lego.scm (leocad): New variable.
5d8312f1 — Tobias Geerinckx-Rice 8 years ago 
gnu: youtube-dl: Update to 2017.07.30.1.

* gnu/packages/video.scm (youtube-dl): Update to 2017.07.30.1.
6862c723 — Tobias Geerinckx-Rice 8 years ago 
gnu: tor: Update to 0.3.0.10.

* gnu/packages/tor.scm (tor): Update to 0.3.0.10.
49962b15 — Ludovic Courtès 8 years ago 
activation: Make sure /etc exists.

Fixes <http://bugs.gnu.org/27146>.
Reported by ng0 <ng0@pragmatique.xyz>.

* gnu/build/activation.scm (activate-etc): Add call to 'mkdir-p'.
ec5495ba — Ludovic Courtès 8 years ago 
doc: 'patches' field of <origin> can list file-like objects.

Fixes <http://bugs.gnu.org/27165>.
Reported by sirgazil <sirgazil@zoho.com>.

* doc/guix.texi (origin Reference): 'patches' can contain file-like
objects.
edd08fb7 — Efraim Flashner 8 years ago 
gnu: glibc@2.22: Fix security issues.

Fixes CVE-2015-{5180,7547}, CVE-2016-{3075,3706,4429}.

* gnu/packages/base.scm (glibc@2.22)[source]: Add patches.
* gnu/packages/patches/glibc-CVE-2015-7547.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
a0ae64a3 — Efraim Flashner 8 years ago 
gnu: glibc@2.23: Fix CVE-2015-5180, CVE-2016-{3075,3706,4429}.

* gnu/packages/base.scm (glibc@2.23)[source]: Add patches.
* gnu/packages/patches/glibc-CVE-2016-3075.patch,
gnu/packages/patches/glibc-CVE-2016-3706.patch,
gnu/packages/patches/glibc-CVE-2016-4429.patch: New files.
* gnu/local.mk (dist_patch_DATA): Register them.
575e5e4e — Efraim Flashner 8 years ago 
gnu: glibc@2.24: Fix CVE-2015-5180.

* gnu/packages/base.scm (glibc@2.24)[source]: Add patch.
* gnu/packages/patches/glibc-CVE-2015-5180.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
2c5cf844 — Leo Famulari 8 years ago 
gnu: python2-conda: Fix build by building with enum34.

* gnu/packages/package-management.scm (python2-conda): Use 'python2-variant'.
[native-inputs]: Add python2-enum34.
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