gnu: samtools: Install libbam.a library. * gnu/packages/bioinformatics.scm (samtools)[arguments]: Add phase "install-library" to install the libbam.a library.
gnu: samtools: Remove patch-makefile-curses phase. * gnu/packages/bioinformatics.scm (samtools)[arguments]: Remove patch-makefile-curses phase, use make-flags instead.
gnu: gcc-5.1: Add specific libvtv patch. * gnu/packages/patches/gcc-5.0-libvtv-runpath.patch: New file. * gnu-system.am (dist_patch_DATA): Add it. * gnu/packages/gcc.scm (gcc-5.1)[source]: Use it.
guix package: Introduce 'evaluate-search-paths'. * guix/scripts/package.scm (evaluate-search-paths): New procedure, with most of the code formerly in 'search-path-environment-variables'. (search-path-environment-variables): Use it.
guix package: Move profile cleaning out of 'search-path-environment-variables'. * guix/scripts/package.scm (user-friendly-profile): New procedure. (search-path-environment-variables): Remove 'profile' local variable. (display-search-paths): Explicitly call 'user-friendly-profile' for the argument to 'search-path-environment-variables'. (guix-package)[process-query]: Likewise.
gnu: Add totem-pl-parser. * gnu/packages/gnome.scm (totem-pl-parser): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
doc: Replace reference to profile.sh with sh-symlink * doc/guix.texi (The Store Monad): Replace reference to "profile.sh", which is not defined until the next node, with "sh-symlink", which is defined immediately above Signed-off-by: Ludovic Courtès <ludo@gnu.org>
gnu: Add libe-book. * gnu/packages/libreoffice.scm (libe-book): New variable. Co-authored-by: John Darrington <jmd@gnu.org>
gnu: Add zeromq. * gnu/packages/networking.scm (zeromq): New variable.
gnu: rename (gnu packages socat) to (gnu packages networking). * gnu/packages/socat.scm: Rename this ... * gnu/packages/networking.scm: ... to this. * gnu-system.am (GNU_SYSTEM_MODULES): Change socat.scm to networking.scm.
gnu: subversion: Update to 1.8.13. * gnu/packages/version-control.scm (subversion): Update to 1.8.13.
gnu: gnupg: Update to 2.1.3. * gnu/packages/gnupg.scm (gnupg): Update to 2.1.3.
gnu: Add dovecot. * gnu/packages/mail.scm (dovecot): New variable.
gnu: acpica: Update to 20150410. * gnu/packages/admin.scm (acpica): Update to 20150410.
gnu: wpa-supplicant: Update to 2.4. * gnu/packages/admin.scm (wpa-supplicant): Update to 2.4.
gnu: parallel: Update to 20150422. * gnu/packages/parallel.scm (parallel): Update to 20150422.
gnu: help2man: Update to 1.46.6. * gnu/packages/man.scm (help2man): Update to 1.46.6.
gnu: dejagnu: Update to 1.5.3. * gnu/packages/dejagnu.scm (dejagnu): Update to 1.5.3.
gnu: Add libwpd. * gnu/packages/libreoffice.scm (libwpd): New variable.
gnu: Add librevenge. * gnu/packages/libreoffice.scm (librevenge): New variable. Co-authored-by: John Darrington <jmd@gnu.org>