gnu: openjdk10: Apply patch again.

This partially reverts commit 7636c49b45adb9870cf416c64bde032ec858a820
where the patch was dropped.

* gnu/packages/java.scm (openjdk10)[source]: Apply patch.

gnu: Add r-annotationhubdata.

* gnu/packages/bioconductor.scm (r-annotationhubdata): New variable.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>

gnu: Add r-affylmgui.

* gnu/packages/bioconductor.scm (r-affylmgui): New variable.

gnu: Add r-tkrplot.

* gnu/packages/cran.scm (r-tkrplot): New variable.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>.

gnu: Add r-affyplm.

* gnu/packages/bioconductor.scm (r-affyplm): New variable.

gnu: Add r-affyilm.

* gnu/packages/bioconductor.scm (r-affyilm): New variable.

gnu: python-google-api-client: Update to 1.12.8.

* gnu/packages/python-web.scm (python-google-api-client): Update to
1.12.8.
[arguments]: Remove custom phase to adjust setup.py.
[native-inputs]: Remove python-oauth2client, python-uritemplate. Move
python-httplib2, python-six ...
[propagated-inputs]: ... here. Add python-google-api-core-1,
python-google-auth-1, python-google-auth-httplib2, python-uritemplate-3.

gnu: python-googleapis-common-protos: Update to 1.56.4.

* gnu/packages/python-web.scm (python-googleapis-common-protos): Update
to 1.56.4.
[arguments]: Enable test suite.

gnu: Add python-google-api-core-1.

* gnu/packages/python-web.scm (python-google-api-core-1): New variable.

gnu: Add python-google-auth-1.

* gnu/packages/python-web.scm (python-google-auth-1): New variable.

gnu: Add python-google-auth-httplib2.

* gnu/packages/python-web.scm (python-google-auth-httplib2): New
variable.

gnu: Add python-uritemplate-3.

* gnu/packages/python-web.scm (python-uritemplate-3): New variable.

gnu: python-httplib2: Update to 0.15.0.

* gnu/packages/python-web.scm (python-httplib2): Update to 0.15.0.
[source]: Download using git.
[arguments]: Add a phase to adjust the test package version
requirements.
[native-inputs]: Add python-flake8, python-future, python-mock,
python-pytest, python-pytest-cov, python-pytest-forked,
python-pytest-randomly, python-pytest-timeout, python-pytest-xdist,
python-six.
[home-page]: Switch to new upstream homepage.

gnu: zig: Increase max-silent-time.

* gnu/packages/zig.scm (zig-0.10)[properties]: Set max-silent-time to 3
hours.

gnu: Add transanno.

* gnu/packages/bioinformatics.scm (transanno): New variable.

gnu: Add rust-autocompress-0.2.

* gnu/packages/crates-io.scm (rust-autocompress-0.2): New variable.

gnu: Add rust-temp-testdir-0.2.

* gnu/packages/crates-io.scm (rust-temp-testdir-0.2): New variable.

gnu: Add rust-bio-0.41.

* gnu/packages/crates-io.scm (rust-bio-0.41): New variable.

gnu: ruby-rugged: Update to 1.6.2-0.6379f23 and enable tests.

* gnu/packages/ruby.scm (ruby-rugged): Update to 1.6.2-0.6379f23.
[source]: Fetch via git.
[arguments]: Enable tests.  Add #:phases.
[native-inputs]: Add git-minimal/pinned.  Remove ruby-minitest and ruby-pry.

gnu: python-django-rq: Update to 2.7.0.

* gnu/packages/django.scm (python-django-rq): Update to 2.7.0.
[arguments]: Replace django-admin.py with django-admin in check phase.