gnu: libxisf: Update to 0.2.11.

* gnu/packages/astronomy.scm (libxisf): Update to 0.2.11.

Change-Id: I79242d42af3db660c46be0baf05e11ea7ac680f7

gnu: gpredict: Update home-page and description.

* gnu/packages/astronomy.scm (gpredict)[home-page]: Update it according
to project's README.
[description]: Add feature detailed list.

Change-Id: If5edc6e50796c7753ac47fac082c267145723361

gnu: indi-2.0: Update to 2.0.5.

* gnu/packages/astronomy.scm (indi-2.0): Update to 2.0.5.

Change-Id: I9cea7e7d11af5a142066f11a2185eb826570afb5

gnu: stellarium: Update to 23.4.

* gnu/packages/astronomy.scm (stellarium): Update to 23.4.
[inputs]: Add nlopt.

Change-Id: Id205ad84ff75a687f6c1fdababcf3040c0c55abd

gnu: python-pytorch-geometric: Disable one test.

* gnu/packages/machine-learning.scm (python-pytorch-geometric)[arguments]:
Disable test_gdc as it occasionally fails.

Change-Id: I9d1dc1b68628801ea1bb5a8bdfa17063990748ea

gnu: libdispatch: Update to 5.9.2.

* gnu/packages/c.scm (libdispatch): Update to 5.9.2.

Change-Id: I119d1de974673aa2c08eb51a7bcaa7ce24aeb0b2

gnu: range-v3: Update to 0.12.0.

* gnu/packages/cpp.scm (range-v3): Update to 0.12.0.
[source]: Remove patch.
* gnu/packages/patches/range-v3-build-with-gcc10.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.

Change-Id: I078937f9aff0da31ede8d472d8739e48bb775c55

gnu: range-v3: Format with 'guix style'.

* gnu/packages/cpp.scm (range-v3): Format with 'guix style'.

Change-Id: I249443e5e5d0f7ef49e33de4f140246a862101d2

gnu: range-v3: Build with newer gcc.

* gnu/packages/cpp.scm (range-v3)[native-inputs]: Remove gcc-9.

Change-Id: I0411d5db3e3df15c6df0a9a010d311fe1c80015c

gnu: python-xgboost: Fix build.

* gnu/packages/machine-learning.scm (python-xgboost)[build-system]: Use
pyproject-build-system.
[arguments]: Move test flags to #:test-flags; disable a few more tests, mostly
to account for a removed dataset; use G-expression; remove custom 'check phase.

Change-Id: I6841a8c159919df85acaa8558248a8775ec5be80

gnu: webkitgtk: Update to 2.42.4 [fixes CVE-2023-42883].

* gnu/packages/webkit.scm (webkitgtk): Update to 2.42.4.

Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>

gnu: emacs-yasnippet: Update to 0.14.0-0.297546f.

* gnu/packages/emacs-xyz.scm (emacs-yasnippet): Update to 0.14.0-0.297546f.
Remove fix-tests patch.
* gnu/packages/patches/emacs-yasnippet-fix-tests.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): De-register it.

Change-Id: I3fda2bb3d879d88f06f9d814b6c8d835d9eafc9f

gitconfig: b4: Automatically add 'Signed-off-by' when applying patches.

Also use --3way to ease conflict resolutions.

* etc/git/gitconfig [b4]: Add shazam-am-flags option.

Change-Id: I6a92909a5b23a8680c16251aafa084b9a48944ea

gnu: Add python-pytorch-geometric.

* gnu/packages/machine-learning.scm (python-pytorch-geometric): New variable.

Change-Id: I9a016cda7d167159437724a878e6512c37106fea

gnu: singular: Update to 4.3.2p10.

* gnu/packages/algebra.scm (singular): Update to 4.3.2p10.

Change-Id: I196d31e3f5605dd51385146ce091d63a4e9eb340

gnu: Add r-papaja.

* gnu/packages/cran.scm (r-papaja): New variable.

Co-authored-by: Lars-Dominik Braun <lars@6xq.net>
Change-Id: Ib5b3a6ff8d52052cf135b2ba36cad3ce295ed6d4

gnu: Add r-tinylabels.

* gnu/packages/cran.scm (r-tinylabels): New variable.

Change-Id: Ie86de4daaf132cd32f896573be747f35e725258e

gnu: Add r-rmdfiltr.

* gnu/packages/cran.scm (r-rmdfiltr): New variable.

Change-Id: I59b92e9364ca4e74a98b80b6cca1a883ab3caec3

gnu: python-chaospy: Ignore deprecation warnings.

* gnu/packages/statistics.scm (python-chaospy)[arguments]: Add phase
'dont-treat-deprecation-warnings-as-error.

Change-Id: Id06404f9e47f7084fefc2e72032882d49e5b546b

gnu: pynac: Update to 0.7.29.

* gnu/packages/sagemath.scm (pynac): Update to 0.7.29.

Change-Id: I3bf2675aea9d8a07fdcfa08471c9d1ca7725e1f7