gnu: r-duckdb: Move to duckdb.
* gnu/packages/cran.scm (r-duckdb): Move from here ...
* gnu/packages/duckdb.scm: ... to here.
Change-Id: Ic735854106fd0b0e693105183b7408d447de882c
gnu: python-duckdb: Move to duckdb.
* gnu/packages/python-xyz.scm (python-duckdb): Move from here ...
* gnu/packages/duckdb.scm: ... to here.
* gnu/packages/python-science.scm: Add (gnu packages duckdb).
Change-Id: Ic8551cdd64f718e62a12576fbc1a38bf861d1644
gnu: duckdb: Update to 1.4.1.
* gnu/packages/duckdb.scm (duckdb): Update to 1.4.1.
Change-Id: Ib9640b2f39ff492404423373f9223f6c71c69f0c
gnu: duckdb: Move to duckdb.
* gnu/packages/databases.scm (duckdb): Move from here ...
* gnu/packages/duckdb.scm: ... to here.
Change-Id: Ie683a1d4d93d556d5d923830ca0132738463c0a8
gnu: Add (gnu packages duckdb) module.
* gnu/packages/duckdb.scm: New file.
* gnu/local.mk: Add to gnu/packages/duckdb.scm scope.
Change-Id: I5a6bbb0114ab588e25a42c8e98a1d2a475d28e0c
gnu: diffoscope: Update to 308.
* gnu/packages/diffoscope.scm (diffoscope): Update to 308.
gnu: gdcm: Fix reference in exported target.
* gnu/packages/bioinformatics.scm (gdcm)
[arguments]<#:phases>{refer-to-charls}: New phase.
Change-Id: I0671b71471c123b041156940640f0f745464052d
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
gnu: icecat: Update to 140.5.0-gnu1 [security fixes].
Includes fixes for CVE-2025-13012, CVE-2025-13013, CVE-2025-13014,
CVE-2025-13015, CVE-2025-13016, CVE-2025-13017, CVE-2025-13018,
CVE-2025-13019, and CVE-2025-13020.
* gnu/packages/gnuzilla.scm (%icecat-base-version, %icecat-build-id): Update.
(icecat-source): Update 'gnuzilla-commit' and hashes.
gnu: mod-host: Add native-search-paths.
* gnu/packages/music.scm (mod-host)[native-search-paths]: Add LV2_PATH
variable.
Change-Id: I8e31ccff2dbbd6f37717f5907037ef54f18d25e5
gnu: cobib: Don't propagated inputs.
This is the final command, not a library.
* gnu/packages/textutils.scm (cobib):[propagated-inputs]: Move all to
[inputs].
Change-Id: I7a5df8a0e265f52e2df9e4732c118ab92763de12
gnu: west: Update to 1.5.0.
* gnu/packages/embedded.scm (west): Update to 1.5.0.
[source]: Switch to git-fetch.
[build-system]: Switch to pyproject-build-system.
[arguments]<#:test-flags>: Ignore failing test.
<#:phases>: Add phase 'configure-tests.
[native-inputs]: Add git-minimal, python-pytest, python-setuptools.
[description]: Improve style.
Change-Id: I325826783313d62f9fa33b5e017d7990ad9527bd
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
gnu: python-pykwalify: Update to 1.8.0.
* gnu/packages/python-xyz.scm (python-pykwalify): Update to 1.8.0.
[source]: Switch to git-fetch.
[build-system]: Switch to pyproject-build-system.
[arguments]<#:test-flags>: Disable test flags.
[native-inputs]: Add python-pytest, python-setuptools and
python-testfixtures.
[propagated-inputs]: Add python-ruamel.yaml.
[synopsis]: Improve style.
Change-Id: Idaeb4ba631f492c937d4d7f6abe4731a9f290d42
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
gnu: python-interlap: Switch to pyproject.
* gnu/packages/python-xyz.scm (python-interlap):
[source]: Switch to git-fetch.
[build-system]: Switch to pyproject-build-system.
[arguments]<#:test-backend, #:test-flags>: Set them.
[native-inputs]: Add python-setuptools.
[description]: Improve style.
Change-Id: I652d4793f240ae1b628a2cc9808841c1b6c8fcd4
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
gnu: python-intelhex: Switch to pyproject.
* gnu/packages/python-xyz.scm (python-intelhex):
[source]: Switch to git-fetch.
[build-system]: Switch to pyproject-build-system.
[arguments]<#:test-backend>: Set it.
[native-inputs]: Add python-setuptools.
[description]: Improve style.
Change-Id: I60ae05c9034c15e9c2d0712d79f4d643e8e55671
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
gnu: python-pyphen: Update to 0.17.2.
* gnu/packages/python-xyz.scm (python-pyphen): Update to 0.17.2.
[source]: Switch to git-fetch.
[build-system]: Switch to pyproject-build-system.
[native-inputs]: Add python-flit-core, python-pytest.
Change-Id: I5022faa0e4f2391f08b43bd002a0643369d391ea
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
gnu: python-bibtexparser: Update to 2.0.0b8.
* gnu/packages/python-xyz.scm (python-bibtexparser): Update to 2.0.0b8.
[source]: Switch to git-fetch.
[build-system]: Switch to pyproject-build-system.
[native-inputs]: Remove python-future. Add python-pylatexenc,
python-pytest and python-setuptools.
(python-bibtexparser-for-cobib): New variable.
* gnu/packages/textutils.scm (cobib)[propagated-inputs]: Remove
python-bibtexparser; add python-bibtexparser-for-cobib.
Change-Id: I924fba9ccf9487dea6409fb4d1e1d69ab026c130
Modified-by: Sharlatan Hellseher <sharlatanus@gmail.com>
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
gnu: python-pyroutelib3: Update to 2.0.0.
* gnu/packages/python-xyz.scm (python-pyroutelib3): Update to 2.0.0.
[source]: Switch to git-fetch.
[build-system]: Switch to pyproject-build-system.
[propagated-inputs]: Add python-protobuf-5.
[native-inputs]: Add python-filelock, python-flit-core, python-pytest.
Change-Id: I15f41b76ec18b22fc239a05559d35ff9f67a8e99
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
gnu: python-dbfread: Update to 2.0.7-0.dce5446.
* gnu/packages/python-xyz.scm (python-dbfread): Update to 2.0.7-0.dce5446.
[source]: Switch to git-fetch.
[build-system]: Switch to pyproject-build-system.
[arguments]<#:phases>: Add phase 'relax-setup.py.
[native-inputs]: Add python-pytest, python-setuptools.
Change-Id: I9bcc3d44124d5a0f4b38d79682ddfca8aa6ee1ff
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
gnu: Add python-berkeleydb.
* gnu/packages/python-xyz.scm (python-berkeleydb): New variable.
(python-bsddb3): Inherit from python-berkeleydb.
Change-Id: Icc9bb816a243f7bbc7b03f067ec4e8dfb9ba5125
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
gnu: python-croniter: Update to 5.0.1.
* gnu/packages/python-xyz.scm (python-croniter): Update to 5.0.1.
[source]: Switch to git-fetch.
[build-system]: Switch to pyproject-build-system.
[native-inputs]: Add python-pytest, python-setuptools.
[propagated-inputs]: Add python-pytz.
Change-Id: Idbe53c299cadb11d2107aba36d8471242d905ceb
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>