gnu: python-rpy2: Propagate python2-singledispatch.
* gnu/packages/python.scm (python-rp2)[native-inputs]: Rename to...
[propagated-inputs]: ... this.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
gnu: java-xz: Update to 1.6.
* gnu/packages/java.scm (java-xz): Update to 1.6.
gnu: guile-lib: Update to 0.2.5
The build was broken since the URL of version 0.2.3 was changed. The archive
was moved into an "old" subdirectory of the original location.
* gnu/packages/guile.scm (guile-lib): Update to 0.2.5.
[make-flags]: Add GUILE_AUTO_COMPILE to prevent guild errors.
[phases]: Remove 'check replacement since it is no longer needed.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
gnu: asymptote: Update to 2.40.
* gnu/packages/plotutils.scm (asymptote): Update to 2.40.
Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
gnu: Add blind.
* gnu/packages/suckless.scm (blind): New package.
gnu: surf: Add 'dmenu' and 'xprop' to 'inputs'.
'dmenu' and 'xprop' are necessary to open a new URL in surf.
* gnu/packages/suckless.scm (surf)[inputs]: Add dmenu and xprop.
[arguments]: Add 'set-dmenu-and-xprop-file-name' phase to patch the
paths to the 'dmenu' and 'xprop' binaries in surf's configuration file.
Signed-off-by: Kei Kebreau <kei@openmailbox.org>
vm: Fix full-boot? option.
* gnu/system/vm.scm (virtualized-operating-system): Add full-boot?
option. Don't add a %store-mapping when full-boot? is passed. This leads
the grub-configuration-file procedure to look for the kernel and initrd in
/ instead of /gnu/store.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
system: grub: Add missing URL in comment.
* gnu/system/grub.scm (grub-root-search): Add missing URL in comment.
gnu: python-colorspacious: Run tests.
* gnu/packages/python.scm (python-colorspacious,
python2-colorspacious)[native-inputs]: Add python-nose.
[arguments]: Add custom 'check phase which runs nosetests.
Signed-off-by: Marius Bakke <mbakke@fastmail.com>
gnu: rofi: Fix test failure.
* gnu/packages/xdisorg.scm (rofi)[arguments]: Disable parallel tests.
gnu: Remove python-sphinx-1.2.3.
* gnu/packages/python.scm (python-sphinx-1.2.3, python2-sphinx-1.2.3): Remove variables.
Signed-off-by: Marius Bakke <mbakke@fastmail.com>
gnu: python-statsmodels: Update to 0.8.0.
* gnu/packages/statistics.scm (python-statsmodels, python2-statsmodels):
Update to 0.8.0.
[source]: Use 'pypi-uri'.
[arguments]: Add more files to matplotlib backend substitution.
* gnu/packages/patches/python-statsmodels-fix-tests.patch: Drop test that
fails with numpy 1.12. Remove previous contents.
gnu: python-pandas: Update to 0.19.2.
* gnu/packages/python.scm (python-pandas, python2-pandas): Update to 0.19.2.
[source]: Use 'pypi-uri'.
gnu: python-matplotlib: Update to 2.0.0.
* gnu/packages/python.scm (python-matplotlib, python2-matplotlib): Update to
2.0.0.
[source]: Remove Tk backend patch, use Github instead of Sourceforge.
[outputs]: Remove "doc" output.
[inputs]: Add python-pyqt.
[propagated-inputs]: Add python-cycler.
[native-inputs]: Remove python-sphinx, python-numpydoc, texlive and texinfo.
(python2-matplotlib)[native-inputs]: Add python2-functools32 and
python2-subprocess32.
(python-matplotlib-documentation, python2-matplotlib-documentation): New
variables.
* gnu/packages/patches/matplotlib-setupext-tk.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove patch.
Signed-off-by: Marius Bakke <mbakke@fastmail.com>
gnu: Add python2-subprocess32.
* gnu/packages/python.scm (python2-subprocess32): New variable.
* gnu/packages/patches/python2-subprocess32-disable-input-test.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
gnu: python-numpy: Update to 1.12.0.
* gnu/packages/python.scm (python-numpy): Update to 1.12.0.
[source]: Use github instead of sourceforge.
[native-inputs]: Add python-cython.
To simplify the handling of dependency cycles (numpy documentation depends
on matplotlib, which depends on numpy), we split out the documentation into
a separate package:
(python-numpy-bootstrap, python2-numpy-bootstrap): Remove variables.
(python-numpy-documentation, python2-numpy-documentation): New variables.
Signed-off-by: Marius Bakke <mbakke@fastmail.com>
gnu: texlive: Fix CVE-2016-10243.
* gnu/packages/patches/texlive-texmf-CVE-2016-10243.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/tex.scm (texlive-texmf-src): Use it.
gnu: libressl: Update to 2.5.1.
* gnu/packages/tls.scm (libressl): Update to 2.5.1.
services: openssh: Parameterize the OpenSSH package used by the service.
* gnu/services/ssh.scm (<openssh-configuration>)[openssh]: New field.
(openssh-activation, openssh-shepherd-service): Use it.