Merge branch 'core-updates'

Merge branch 'master' into core-updates

Conflicts:
	gnu-system.am

gnu: Synchronize GNU package descriptions with upstream.

These are mostly two-space-after-end-of-sentence-period changes
resulting from commit 3a09e1d2.

gnu: glibc: Update to 2.20.

* gnu/packages/patches/glibc-CVE-2014-5119.patch: Remove.
* gnu-system.am (dist_patch_DATA): Remove it.
* gnu/packages/base.scm (glibc): Update to 2.20.  Remove patch.
  Raise minimum linux version to 2.6.32.

gnu: Add missing import to (gnu packages base).

* gnu/packages/base.scm: Import (gnu packages base).

Merge branch 'master' into core-updates

Conflicts:
	gnu/packages/base.scm

gnu: Split (gnu packages base), adding (gnu packages commencement).

* gnu/packages/base.scm (gnu-make-boot0, diffutils-boot0,
  findutils-boot0, %boot0-inputs, nix-system->gnu-triplet, boot-triplet,
  binutils-boot0, gcc-boot0, perl-boot0, linux-libre-headers-boot0,
  texinfo-boot0, %boot1-inputs, glibc-final-with-bootstrap-bash,
  cross-gcc-wrapper, static-bash-for-glibc, glibc-final,
  gcc-boot0-wrapped, %boot2-inputs, binutils-final, libstdc++,
  gcc-final, ld-wrapper-boot3, %boot3-inputs, bash-final, %boot4-inputs,
  guile-final, gnu-make-final, ld-wrapper, coreutils-final, grep-final,
  %boot5-inputs, %final-inputs, canonical-package, gcc-toolchain,
  gcc-toolchain-4.8, gcc-toolchain-4.9): Move to...
* gnu/packages/commencement.scm: ... here.  New file.
* gnu-system.am (GNU_SYSTEM_MODULES): Add it.
* build-aux/check-final-inputs-self-contained.scm: Adjust accordingly.
* gnu/packages/cross-base.scm: Likewise.
* gnu/packages/make-bootstrap.scm: Likewise.
* guix/build-system/cmake.scm (cmake-build): Likewise.
* guix/build-system/gnu.scm (standard-packages, gnu-build,
  gnu-cross-build): Likewise.
* guix/build-system/perl.scm (perl-build): Likewise.
* guix/build-system/python.scm (python-build): Likewise.
* guix/build-system/trivial.scm (guile-for-build): Likewise.
* guix/download.scm (url-fetch): Likewise.
* guix/gexp.scm (default-guile): Likewise.
* guix/git-download.scm (git-fetch): Likewise.
* guix/monads.scm (run-with-store): Likewise.
* guix/packages.scm (default-guile): Likewise.
* guix/scripts/package.scm (guix-package): Likewise.
* guix/scripts/refresh.scm: Likewise.
* guix/svn-download.scm (svn-fetch): Likewise.
* tests/builders.scm (%bootstrap-inputs, %bootstrap-search-paths):
  Likewise.
* tests/packages.scm ("GNU Make, bootstrap"): Likewise.
* tests/guix-package.sh: Likewise.
* gnu/services/base.scm: Use 'canonical-package' instead of xxx-final.
* gnu/services/xorg.scm: Likewise.
* gnu/system/vm.scm: Likewise.
* guix/scripts/pull.scm (guix-pull): Likewise.

gnu: glibc: Fix CVE-2014-5119.

* gnu/packages/patches/glibc-CVE-2014-5119.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/base.scm (glibc): Add the patch.

gnu: bootstrap: Add 'file' to %boot0-inputs and %final-inputs.

* gnu/packages/base.scm (file-boot0): New variable.
  (%boot0-inputs): Add 'file-boot0'.
  (%final-inputs): Add 'file' to list of packages to 'finalize'.

gnu: tar: Update to 1.28.

* gnu/packages/base.scm (tar): Update to 1.28.

gnu: coreutils: Update to 8.23.

* gnu/packages/patches/coreutils-skip-nohup.patch: Remove.
* gnu-system.am (dist_patch_DATA): Remove coreutils-skip-nohup.patch.
* gnu/packages/patches/coreutils-dummy-man.patch: Adapt for 8.23.
* gnu/packages/base.scm (coreutils): Update to 8.23.

gnu: Enable tests for patch.

* gnu/packages/base.scm (patch): Enable test and add "ed" as input.

Merge branch 'core-updates'

system: Prefer packages from %FINAL-INPUTS.

* gnu/packages/base.scm (canonical-package): New procedure.
* gnu/system.scm (%base-packages): Pass BASH, COREUTILS, FINDUTILS,
  GREP, and SED through 'canonical-package'.

gnu: Remove dependency from gzip to the bootstrap binaries.

* gnu/packages/base.scm (grep-final): New variable.
  (%boot5-inputs): Add it.
  (%final-inputs): Use it.

gnu: grep: Upgrade to 2.20.

* gnu/packages/base.scm (grep): Upgrade to 2.20.

gnu: coreutils: Remove run-time dependency on Bash.

* gnu/packages/base.scm (coreutils)[arguments] <patch-shell-references>:
  Leave src/split.c unpatched.  Set $SHELL.  Use .../bin/sh and not
  .../bin/bash in tests.

gnu: gcc: Add a "lib" output.

* gnu/packages/gcc.scm (gcc-4.7)[configure-flags]: Add
  --with-gxx-include-dir.
  [outputs]: New field.
  [arguments] <phases>: Adjust to use the "lib" output.  Add
  'substitute*' calls for "libstdc++-v3/python/Makefile.in" and
  "gcc/config.in".
* gnu/packages/base.scm (gcc-boot0) <symlink-libgcc_eh>: Use the "lib"
  output.
  (cross-gcc-wrapper): Add 'outputs' field.
  (glibc-final)[arguments]: Adjust #:allowed-references to list
  '(GCC-BOOT0 "lib").
  (libstdc++): Add 'outputs' field.
  (gcc-final)[arguments]: Add "lib" to #:allowed-references.
* gnu/packages/make-bootstrap.scm (%gcc-static): Add 'outputs' field.

gnu: glibc-final: Remove top-level circular dependency.

This fixes a top-level circular dependency between linux.scm and
base.scm introduced in 2e92375.

* gnu/packages/base.scm (glibc-final): Remove call to
  'package-with-restricted-references', and use an 'arguments' field
  instead.

gnu: gcc-final: Make sure the output refers only to libc.

* gnu/packages/base.scm (gcc-final)[arguments]: Add
  #:allowed-references.