Merge branch 'master' into core-updates

Conflicts:
	gnu/packages/base.scm

gnu: Split (gnu packages base), adding (gnu packages commencement).

* gnu/packages/base.scm (gnu-make-boot0, diffutils-boot0,
  findutils-boot0, %boot0-inputs, nix-system->gnu-triplet, boot-triplet,
  binutils-boot0, gcc-boot0, perl-boot0, linux-libre-headers-boot0,
  texinfo-boot0, %boot1-inputs, glibc-final-with-bootstrap-bash,
  cross-gcc-wrapper, static-bash-for-glibc, glibc-final,
  gcc-boot0-wrapped, %boot2-inputs, binutils-final, libstdc++,
  gcc-final, ld-wrapper-boot3, %boot3-inputs, bash-final, %boot4-inputs,
  guile-final, gnu-make-final, ld-wrapper, coreutils-final, grep-final,
  %boot5-inputs, %final-inputs, canonical-package, gcc-toolchain,
  gcc-toolchain-4.8, gcc-toolchain-4.9): Move to...
* gnu/packages/commencement.scm: ... here.  New file.
* gnu-system.am (GNU_SYSTEM_MODULES): Add it.
* build-aux/check-final-inputs-self-contained.scm: Adjust accordingly.
* gnu/packages/cross-base.scm: Likewise.
* gnu/packages/make-bootstrap.scm: Likewise.
* guix/build-system/cmake.scm (cmake-build): Likewise.
* guix/build-system/gnu.scm (standard-packages, gnu-build,
  gnu-cross-build): Likewise.
* guix/build-system/perl.scm (perl-build): Likewise.
* guix/build-system/python.scm (python-build): Likewise.
* guix/build-system/trivial.scm (guile-for-build): Likewise.
* guix/download.scm (url-fetch): Likewise.
* guix/gexp.scm (default-guile): Likewise.
* guix/git-download.scm (git-fetch): Likewise.
* guix/monads.scm (run-with-store): Likewise.
* guix/packages.scm (default-guile): Likewise.
* guix/scripts/package.scm (guix-package): Likewise.
* guix/scripts/refresh.scm: Likewise.
* guix/svn-download.scm (svn-fetch): Likewise.
* tests/builders.scm (%bootstrap-inputs, %bootstrap-search-paths):
  Likewise.
* tests/packages.scm ("GNU Make, bootstrap"): Likewise.
* tests/guix-package.sh: Likewise.
* gnu/services/base.scm: Use 'canonical-package' instead of xxx-final.
* gnu/services/xorg.scm: Likewise.
* gnu/system/vm.scm: Likewise.
* guix/scripts/pull.scm (guix-pull): Likewise.

Merge branch 'master' into core-updates

guix refresh: Use (ice-9 format).

* guix/scripts/refresh.scm: Use (ice-9 format).

guix: refresh: Add --list-dependent option.

* guix/packages.scm (package-direct-inputs): New procedure.
* gnu/packages.scm (vhash-refq, package-direct-dependents)
  (package-transitive-dependents, package-covering-dependents): New procedures.
* guix/scripts/refresh.scm (%options, show-help, guix-refresh): Add
  --list-dependent option.
* doc/guix.texi (Invoking guix refresh): Document '--list-dependent' option.

guix: refresh: Correctly identify invalid package names.

* guix/scripts/refresh.scm (guix-refresh): Check for null list
  returned by find-packages-by-name rather than #f.

guix refresh: Keep only the newest versions of packages as upgrade candidates.

* guix/scripts/refresh.scm (guix-refresh)[keep-newest]: New procedure.
  Use it to keep only once copy of each package.

Use `port-sha256' and `open-sha256-port'.

* guix/derivations.scm (derivation-hash): Add comment as to why we keep
  the plain `sha256' call.
* guix/scripts/download.scm (guix-download): Use `port-sha256' instead
  of (compose sha256 get-bytevector-all).
* guix/scripts/refresh.scm (update-package): Likewise.

Move `sha256' to (guix hash).

* guix/utils.scm (sha256): Move to...
* guix/hash.scm: ... here.  New file.
* Makefile.am (MODULES): Add it.
* guix/derivations.scm, guix/scripts/download.scm,
  guix/scripts/hash.scm, guix/scripts/refresh.scm, tests/base32.scm,
  tests/derivations.scm, tests/store.scm: Use (guix hash).

guix refresh: Add '--key-download'.

* guix/gnu-maintenance.scm (download-tarball): Add a 'key-download'
  keyword argument and pass it to 'gnupg-verify*'.  Make
  'archive-type' a keyword argument.
  (package-update): Add a 'key-download' keyword argument.  Pass
  'archive-type' and 'key-download' keyword arguments to
  'download-tarball'.

* guix/gnupg.scm: Import (ice-9 i18n) and (guix ui).
  (gnupg-verify*): Add a 'key-download' keyword argument and adjust
  'gnupg-verify*' to use it.  Make 'server' a keyword argument.

* guix/scripts/refresh.scm (show-help, %options): Add and document
  '--key-download'.
  (update-package): Add a 'key-download' keyword argument and pass it
  to 'package-update'.
  (guix-refresh): Pass 'key-download' to 'update-package'.  Limit
  lines to a maximum of 79 characters.

refresh: Add `--key-server' and `--gpg'.

* guix/scripts/refresh.scm (%options): Add `--key-server' and `--gpg'.
  (show-help): Update accordingly.
  (update-package): New procedure, formerly in `guix-refresh'.
  (guix-refresh): Use it.  Parameterize `%openpgp-key-server' and
  `%gpg-command'.

refresh: Gracefully handle failure to download a tarball.

* guix/scripts/refresh.scm (guix-refresh): When updating a source file,
  gracefully handle the case where TARBALL is #f.
  Reported by Nikita Karetnikov <nikita@karetnikov.org>.

refresh: Change default to not update source files.

* guix/scripts/refresh.scm (%options): Change `--dry-run' to `--update'.
  (show-help): Adjust accordingly.
  (guix-refresh): Likewise.

ui: Add `args-fold*' and use it.

* guix/ui.scm (args-fold*): New procedure.
* guix/scripts/build.scm, guix/scripts/download.scm,
  guix/scripts/gc.scm, guix/scripts/hash.scm, guix/scripts/import.scm,
  guix/scripts/package.scm, guix/scripts/pull.scm,
  guix/scripts/refresh.scm: Use `args-fold*' instead of `args-fold'.

Merge branch 'master' into core-updates

Conflicts:
	Makefile.am
	gnu/packages/autotools.scm
	gnu/packages/guile.scm
	gnu/packages/python.scm
	gnu/packages/shishi.scm
	guix/gnu-maintenance.scm
	guix/scripts/build.scm
	guix/scripts/gc.scm
	guix/scripts/package.scm
	guix/scripts/substitute-binary.scm
	guix/ui.scm
	nix/nix-daemon/guix-daemon.cc
	test-env.in
	tests/nar.scm
	tests/store.scm

refresh: Add `--select'.

* guix/scripts/refresh.scm (%options): Add `--select'.
  (show-help): Likewise.  Augment initial help text.
  (guix-refresh)[core-package?]: New procedure.
  Use it when selecting packages.

Add `guix refresh' and related auto-update tools.

* guix/gnu-maintenance.scm (ftp-server/directory)[quirks]: Add glib.
  (package-update-path, download-tarball, package-update,
  update-package-source): New procedures.
* guix/gnupg.scm, guix/scripts/refresh.scm: New files.
* Makefile.am (MODULES): Add them.
* guix/utils.scm (file-extension): New procedure.