~ruther/guix-local

ref: 9daf074a7a9ea77017622b2b244e3a2cdc6af7b2 guix-local/gnu/packages/bioconductor.scm -rw-r--r-- 859.5 KiB
10345d2f — Ricardo Wurmus 2 years ago
gnu: r-clusterprofiler: Update to 4.10.1.

* gnu/packages/bioconductor.scm (r-clusterprofiler): Update to 4.10.1.

Change-Id: I05b41c27d1e1ac8b2887845df5a4a75d45513929
48e458e6 — Ricardo Wurmus 2 years ago
gnu: r-zlibbioc: Update to 1.48.2.

* gnu/packages/bioconductor.scm (r-zlibbioc): Update to 1.48.2.
[native-inputs]: Add r-knitr.

Change-Id: Iee1c599473d30532660eb3770cf471ff979530dd
b11f7c18 — Ricardo Wurmus 2 years ago
gnu: r-stringdb: Update to 2.14.3.

* gnu/packages/bioconductor.scm (r-stringdb): Update to 2.14.3.
[propagated-inputs]: Remove r-rcurl; add r-httr.

Change-Id: Id46873bee69cdd1047002db3505ff5420097e9e9
74066baa — Ricardo Wurmus 2 years ago
gnu: r-gsva: Update to 1.50.1.

* gnu/packages/bioconductor.scm (r-gsva): Update to 1.50.1.

Change-Id: Ib298992cb9ea4615fe3888e799c332e778a7b5be
7416d0f2 — Ricardo Wurmus 2 years ago
gnu: r-genomicfeatures: Update to 1.54.4.

* gnu/packages/bioconductor.scm (r-genomicfeatures): Update to 1.54.4.
[propagated-inputs]: Remove r-rcurl; add r-httr and r-rjson.

Change-Id: Iaed5177d04bc1c292dfad607f82401f45cfd02bc
df26e72f — Ricardo Wurmus 2 years ago
gnu: r-genomeinfodb: Update to 1.38.7.

* gnu/packages/bioconductor.scm (r-genomeinfodb): Update to 1.38.7.
[propagated-inputs]: Remove r-rcurl.

Change-Id: Ifc265a49ed946f3548ff279b930a8346c42025a8
b4939848 — Ricardo Wurmus 2 years ago
gnu: r-deseq2: Update to 1.42.1.

* gnu/packages/bioconductor.scm (r-deseq2): Update to 1.42.1.

Change-Id: Ida0b7ad662c44b2b12af487bb6aa8364874ce3da
db7d9e6c — Ricardo Wurmus 2 years ago
gnu: r-biostrings: Update to 2.70.3.

* gnu/packages/bioconductor.scm (r-biostrings): Update to 2.70.3.

Change-Id: I4a921a148d9f54be13967ed0e3092353a683f20f
f97a8a86 — Ricardo Wurmus 2 years ago
gnu: r-coregx: Update to 2.6.1.

* gnu/packages/bioconductor.scm (r-coregx): Update to 2.6.1.

Change-Id: Icb0eb5a7697811f4272cda3d42d3c428bb59bd23
900ad495 — Ricardo Wurmus 2 years ago
gnu: r-asics: Update to 2.18.1.

* gnu/packages/bioconductor.scm (r-asics): Update to 2.18.1.

Change-Id: I760771fd8fe57984ae1d0c96b72cb63562a1b43e
f3ea06ba — Ricardo Wurmus 2 years ago
gnu: r-snprelate: Update to 1.36.1.

* gnu/packages/bioconductor.scm (r-snprelate): Update to 1.36.1.

Change-Id: I5cf14d463c0f4ca3707a8ac33c7a06baa4337789
82a44941 — Ricardo Wurmus 2 years ago
gnu: r-s4arrays: Update to 1.2.1.

* gnu/packages/bioconductor.scm (r-s4arrays): Update to 1.2.1.

Change-Id: I68c0ee03264073e8816fc92fbaa97ebb6c5036ed
c202079e — Ricardo Wurmus 2 years ago
gnu: r-ggcyto: Update to 1.30.2.

* gnu/packages/bioconductor.scm (r-ggcyto): Update to 1.30.2.

Change-Id: I29c123aa60347b491412631f036923c3bbb7d6c9
f83fbb93 — Ricardo Wurmus 2 years ago
gnu: r-ggtree: Update to 3.10.1.

* gnu/packages/bioconductor.scm (r-ggtree): Update to 3.10.1.

Change-Id: I62eec59a6be3f806261198a1d39eb38ee86a9a79
7ddc66bd — Ricardo Wurmus 2 years ago
gnu: r-nebulosa: Update to 1.12.1.

* gnu/packages/bioconductor.scm (r-nebulosa): Update to 1.12.1.
[propagated-inputs]: Remove r-seurat; add r-ggrastr and r-seuratobject.

Change-Id: If301102ec02ce618ed1ebeff17a9d7e0845e847c
c2e428b2 — Ricardo Wurmus 2 years ago
gnu: r-conos: Update to 1.5.2.

* gnu/packages/bioconductor.scm (r-conos): Update to 1.5.2.

Change-Id: Ia2192481d7d829ef47fec23d4fc8c028abce7098
cb478503 — Ricardo Wurmus 2 years ago
gnu: r-dmrseq: Update to 1.22.1.

* gnu/packages/bioconductor.scm (r-dmrseq): Update to 1.22.1.

Change-Id: I7c05a4927a3984917c6de7bc5daa3f28794894d7
7d69eb77 — Ricardo Wurmus 2 years ago
gnu: r-beachmat: Update to 2.18.1.

* gnu/packages/bioconductor.scm (r-beachmat): Update to 2.18.1.

Change-Id: I854c4c21cad66e3fb2bfe63fe01c31c3aff7d109
9eb9e1a5 — Ricardo Wurmus 2 years ago
gnu: r-hdf5array: Update to 1.30.1.

* gnu/packages/bioconductor.scm (r-hdf5array): Update to 1.30.1.

Change-Id: I48d733554b9c74e10d29b123008ba6d20fa85641
01c71557 — Ricardo Wurmus 2 years ago
gnu: r-variancepartition: Update to 1.32.5.

* gnu/packages/bioconductor.scm (r-variancepartition): Update to 1.32.5.

Change-Id: I9195cbe28f85001bcd91fa3d57f0017db5b352b7
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