gnu: git: Update to 2.7.4 [fixes CVE-2016-2315 and CVE-2016-2324].
* gnu/packages/version-control.scm (git): Update to 2.7.4.
(git-manpages)[source]: Update hash.
gnu: aria2: Update to 1.22.0.
* gnu/packages/bittorrent.scm (aria2): Update to 1.22.0.
gnu: mpv: Update to 0.17.0.
* gnu/packages/video.scm (mpv): Update to 0.17.0.
gnu: Rename Java packages to match new naming specification.
* gnu/packages/bioinformatics.scm (htsjdk): Rename to...
(java-htsjdk): ...this.
(ngs-java): Rename to...
(java-ngs): ...this.
(ncbi-vdb)[arguments,inputs]: Use new name.
* gnu/packages/java.scm (swt): Rename to...
(java-swt): ...this.
* gnu/packages/music.scm (tuxguitar)[make-flags,inputs,arguments]: Use
new name of package "swt".
gnu: python2-plastid: Propagate setuptools.
* gnu/packages/bioinformatics.scm (python2-plastid)[native-inputs]: Move
python2-setuptools from here...
[propagated-inputs]: ...to here.
gnu: r: Update to 3.2.5.
* gnu/packages/statistics.scm (r): Update to 3.2.5.
gnu: Add icedtea-8.
* gnu/packages/java.scm (icedtea-8): New variable.
gnu: Add python-plastid.
* gnu/packages/bioinformatics.scm (python-plastid, python2-plastid): New
variables.
gnu: Add python-twobitreader.
* gnu/packages/bioinformatics.scm (python-twobitreader,
python2-twobitreader): New variables.
gnu: Add cabextract.
* gnu/packages/compression.scm (cabextract): New variable.
Signed-off-by: Leo Famulari <leo@famulari.name>
gnu: Add dillo.
* gnu/packages/dillo.scm: New file.
* gnu-system.am (GNU_SYSTEM_MODULES): Add it.
Signed-off-by: Leo Famulari <leo@famulari.name>
gnu: fltk: Add Xft support.
* gnu/packages/fltk.scm (fltk)[inputs]: Add libxft.
Signed-off-by: Leo Famulari <leo@famulari.name>
gnu: vlc: Make 'plugins.dat' generation reproducible.
Fixes <http://bugs.gnu.org/23307>.
* gnu/packages/video.scm (vlc)[arguments]: Add #:phases.
gnu: vlc: Do not capture the build time.
* gnu/packages/video.scm (vlc)[source]: Add 'snippet'.
gnu: ffmpeg: Re-add 2.8.6.
* gnu/packages/video.scm (ffmpeg-2.8): New variable.
gnu: ruby-bio-commandeer: Update to 0.1.3.
* gnu/packages/ruby.scm (ruby-bio-commandeer): Update to 0.1.3.
mapped-devices: LUKS partitions can be designated by their UUID.
* gnu/system/mapped-devices.scm (device-mapping-service-type): Add
'modules' and 'imported-modules' fields to 'shepherd-service'.
(open-luks-device): Use 'find-partition-by-luks-uuid' to lookup the
partition when SOURCE is a bytevector.
* gnu/system/linux-initrd.scm (base-initrd): Augment 'use-modules'
form.
* doc/guix.texi (Mapped Devices): Give example with a UUID.
mapped-devices: 'mapped-device-service' takes a <mapped-device>.
* gnu/system/mapped-devices.scm (device-mapping-service): Take a
<mapped-device> instead of 3 parameters.
(device-mapping-service-type): Adjust accordingly.
* gnu/system.scm (device-mapping-services): Adjust accordingly.
services: Move 'device-mapping-service' to (gnu system mapped-devices).
* gnu/services/base.scm (device-mapping-service-type)
(device-mapping-service): Move to...
* gnu/system/mapped-devices.scm (device-mapping-service-type):
(device-mapping-service): ... here. New variables.