~ruther/guix-local

ref: 8e7189634077367d6c7dae84b713fcd7f53fd328 guix-local/gnu/packages/python.scm -rw-r--r-- 494.0 KiB
8e718963 — Tobias Geerinckx-Rice 9 years ago 
gnu: python-psycopg2: Update to 2.6.2.

* gnu/packages/python.scm (python-psycopg2): Update to 2.6.2.
35e1a0f1 — Tobias Geerinckx-Rice 9 years ago 
gnu: python-zope-component: Update to 4.3.0.

* gnu/packages/python.scm (python-zope-component): Update to 4.3.0.
[source]: Use pypi-uri.
c56ad5e2 — Tobias Geerinckx-Rice 9 years ago 
gnu: python-atomicwrites: Update to 1.1.5.

* gnu/packages/python.scm (python-atomicwrites): Update to 1.1.5.
4c4d4df3 — Tobias Geerinckx-Rice 9 years ago 
gnu: python-texttable: Update to 0.8.7.

* gnu/packages/python.scm (python-texttable): Update to 0.8.7.
d5c183d1 — Tobias Geerinckx-Rice 9 years ago 
gnu: python-feedgenerator: Update to 1.9.

* gnu/packages/python.scm (python-feedgenerator): Update to 1.9.
d25bee26 — Tobias Geerinckx-Rice 9 years ago 
gnu: python-wrapt: Update to 1.10.8.

* gnu/packages/python.scm (python-wrapt): Update to 1.10.8.
[source]: Use pypi-uri.
b9463fdb — Tobias Geerinckx-Rice 9 years ago 
gnu: python-py: Update to 1.4.32.

* gnu/packages/python.scm (python-py): Update to 1.4.32.
5095bc7d — Tobias Geerinckx-Rice 9 years ago 
gnu: python-sphinx-cloud-sptheme: Update to 1.8.0.

* gnu/packages/python.scm (python-sphinx-cloud-sptheme): Update to 1.8.0.
9e59478f — Tobias Geerinckx-Rice 9 years ago 
gnu: python-wcwidth: Update to 0.1.7.

* gnu/packages/python.scm (python-wcwidth): Update to 0.1.7.
[source]: Use pypi-uri.
4ffbe8c6 — Tobias Geerinckx-Rice 9 years ago 
gnu: python-markdown: Update to 2.6.8.

* gnu/packages/python.scm (python-markdown): Update to 2.6.8.
4f9998c6 — Ricardo Wurmus 9 years ago 
gnu: snakemake: Add runtime dependencies.

* gnu/packages/python.scm (snakemake)[propagated-inputs]: Add python-wrapt and
python-requests.
315944a3 — Arun Isaac 9 years ago 
gnu: Add python-pylint.

* gnu/packages/python.scm (python-pylint, python2-pylint): New variables.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
61550ded — Arun Isaac 9 years ago 
gnu: Add python2-coverage-test-runner.

* gnu/packages/python.scm (python2-coverage-test-runner): New variable.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
23db3fc6 — Arun Isaac 9 years ago 
gnu: Add python-configparser.

* gnu/packages/python.scm (python-configparser, python2-configparser): New variables.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
965a083e — Arun Isaac 9 years ago 
gnu: Add python2-backports-functools-lru-cache.

* gnu/packages/python.scm (python2-backports-functools-lru-cache): New variable.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
6ba0af79 — Arun Isaac 9 years ago 
gnu: Add python-isort.

* gnu/packages/python.scm (python-isort, python2-isort): New variables.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
d5ef113c — Arun Isaac 9 years ago 
gnu: Add python-astroid.

* gnu/packages/python.scm (python-astroid, python2-astroid): New variables.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
ef71ed8f — Ricardo Wurmus 9 years ago 
gnu: snakemake: Update to 3.11.2.

* gnu/packages/python.scm (snakemake): Update to 3.11.2.
2d7c4ae3 — Ricardo Wurmus 9 years ago 
gnu: r: Rename to r-minimal.

* gnu/packages/statistics.scm (r): Rename to...
(r-minimal): ...this new variable.
(r-with-recommended-packages): Rename to...
(r): ...this.
* guix/build-system/r.scm (default-r): Reference r-minimal.
* gnu/packages/emacs.scm (emacs-ess)[inputs],
gnu/packages/machine-learning.scm (shogun)[inputs],
gnu/packages/python.scm (python-rpy2)[inputs],
gnu/packages/bioinformatics.scm (ribotaper)[inputs],
(couger)[propagated-inputs],
(roary)[inputs],
(rsem)[inputs],
(rcas-web)[inputs]: Change "r" to "r-minimal".
aeb64f3c — Ricardo Wurmus 9 years ago 
gnu: r: Do not build recommended packages.

* gnu/packages/statistics.scm (r)[arguments]: Rename phase
"build-recommended-packages-reproducibly" to "build-reproducibly"; add
configure flag "--without-recommended-packages".
* guix/import/cran.scm (default-r-packages): Remove recommended packages.
* gnu/packages/python.scm (python-rpy2)[inputs]: Add r-survival.
* gnu/packages/bioinformatics.scm (r-ape)[propagated-inputs]: Add r-lattice
and r-nlme.
(r-vegan)[propagated-inputs]: Add r-mass.
(r-genefilter)[propagated-inputs]: Add r-survival.
(r-grohmm)[propagated-inputs]: Add r-mass.
(r-bioccheck)[propagated-inputs]: Add r-codetools.
(r-summarizedexperiment)[propagated-inputs]: Add r-matrix.
(r-topgo)[propagated-inputs]: Add r-lattice.
(r-sva)[propagated-inputs]: Add r-mgcv.
(r-raremetals2)[propagated-inputs]: Add r-mass.
(r-vsn)[propagated-inputs]: Add r-lattice.
(r-pcamethods)[propagated-inputs]: Add r-mass.
* gnu/packages/bioinformatics.scm (r-ggplot2)[propagated-inputs]: Add r-mass.
(r-locfit)[propagated-inputs]: Add r-lattice.
(r-coda)[propagated-inputs]: Add r-lattice.
(r-irlba)[propagated-inputs]: Add r-matrix.
(r-glmnet)[propagated-inputs]: Add r-matrix.
(r-e1071)[propagated-inputs]: Add r-class.
(r-spams)[propagated-inputs]: Add r-lattice and r-matrix.
(r-hmisc)[propagated-inputs]: Add r-cluster, r-foreign, r-lattice, r-nnet, and
r-rpart.
(r-zoo)[propagated-inputs]: Add r-lattice.
(r-mixtools)[propagated-inputs]: Add r-boot and r-mass.
(r-flexmix)[propagated-inputs]: Add r-lattice and r-nnet.
(r-prabclus)[propagated-inputs]: Add r-mass.
(r-fpc)[propagated-inputs]: Add r-class, r-cluster, and r-mass.
(r-rcppeigen)[propagated-inputs]: Add r-matrix.
(r-matrixmodels)[propagated-inputs]: Add r-matrix.
(r-lme4)[propagated-inputs]: Add r-mass and r-nlme.
(r-pbkrtest)[propagated-inputs]: Add r-mass and r-matrix.
(r-car)[propagated-inputs]: Add r-mass, r-mgcv, and r-nnet.
(r-tclust)[propagated-inputs]: Add r-cluster.
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