gnu: Add python-munkres.
* gnu/packages/python.scm (python-munkres, python2-munkres): New variables.
gnu: Add python-vobject.
* gnu/packages/python.scm (python-vobject, python2-vobject): New variables.
gnu: Split python2-pyicu into python-pyicu and python2-pyicu.
* gnu/packages/python.scm (python2-pyicu): Split variable into...
(python-pyicu, python2-pyicu): ...both Python variants.
(python-pyicu)[arguments]: Enable tests.
gnu: python2-pyicu: Update to 1.9.2.
* gnu/packages/python.scm (python2-pyicu): Update to 1.9.2.
gnu: Add python2-atomicwrites.
* gnu/packages/python.scm (python2-atomicwrites): New variable.
gnu: python-hypothesis: Update to 3.1.0.
* gnu/packages/python.scm (python-hypothesis, python2-hypothesis): Update to
3.1.0.
gnu: python-cryptography, python-cryptography-vectors: Update to 1.2.3.
These packages should be updated together.
* gnu/packages/python.scm (python-cryptography): Update to 1.2.3.
(python-cryptography-vectors): Update to 1.2.3.
gnu: python-pysam, python2-pysam: Move to bioinformatics.scm.
* gnu/packages/python.scm (python-pysam, python2-pysam): Move to...
* gnu/packages/bioinformatics.scm (python-pysam, python2-pysam):
...here.
gnu: Remove python2-pil.
python2-pil is vulnerable to several security issues (CVE-2016-0740,
CVE-2016-0775, and CVE-2016-2533). Fortunately, python2-pillow provides
equivalent functionality, so this package can be cleanly removed.
* gnu/packages/python.scm (python2-pil): Remove variable.
gnu: python-tornado: Update to 4.3.
* gnu/packages/python.scm (python-tornado): Update to 4.3.
[native-inputs]: Add python-backports-abc.
(python2-tornado)[inputs]: Add python2-singledispatch.
gnu: Add python-backports-abc.
* gnu/packages/python.scm (python-backports-abc): New variable.
gnu: Fix misplaced commas (unquote).
Fix many occurrences of comma (unquote) being placed immediately after the
previous list item, e.g. ("ncurses", ncurses) in the inputs.
* gnu/packages/base.scm (patch, gnu-make),
gnu/packages/bioinformatics.scm (hmmer),
gnu/packages/bittorrent.scm (aria2),
gnu/packages/compression.scm (pbzip2),
gnu/packages/databases.scm (recutils),
gnu/packages/fonts.scm (font-terminus),
gnu/packages/freedesktop.scm (xdg-utils, elogind),
gnu/packages/games.scm (gnujump),
gnu/packages/gnome.scm (libidl, gnumeric, eog, gedit),
gnu/packages/gnunet.scm (gnunet),
gnu/packages/gnuzilla.scm (mozjs, nspr),
gnu/packages/gtk.scm (gtksourceview, gdk-pixbuf),
gnu/packages/lua.scm (lua),
gnu/packages/openstack.scm (python-swiftclient),
gnu/packages/perl.scm (perl-json-any),
gnu/packages/polkit.scm (polkit-qt),
gnu/packages/python.scm (wrap-python3, python-oauthlib)
(python-mccabe-0.2.1, python-contextlib2, python2-rauth),
gnu/packages/qt.scm (qtkeychain),
gnu/packages/ruby.scm (ruby-nokogiri),
gnu/packages/screen.scm (screen),
gnu/packages/ssh.scm (libssh),
gnu/packages/video.scm (ffmpeg, mplayer),
gnu/packages/vim.scm (vim),
gnu/packages/xdisorg.scm (redshift),
gnu/packages/xfce.scm (xfce4-panel, xfce4-settings),
gnu/packages/xnee.scm (xnee),
gnu/packages/xorg.scm (font-adobe100dpi, font-adobe75dpi),
gnu/packages/zsh.scm (zsh): Fix misplaced commas (unquote).
gnu: Add python-psycopg2.
* gnu/packages/python.scm (python-psycopg2, python2-psycopg2): New variables.
gnu: python-decorator: Update to 4.0.9.
* gnu/packages/python.scm (python-decorator): Update to 4.0.9.
gnu: python-traitlets: Update to 4.1.0.
* gnu/packages/python.scm (python-traitlets): Update to 4.1.0.
[native-inputs]: Add python-mock.
gnu: python-mccabe: Update to 0.4.0.
* gnu/packages/python.scm (python-mccabe): Update to 0.4.0.
[inputs]: Add python-pytest, python-pytest-runner.
(python-mccabe-0.2.1)[inputs]: Only use python-setuptools.
gnu: python-flake8: Update to 2.5.4.
* gnu/packages/python.scm (python-flake8): Update to 2.5.4.
[inputs]: Use recent python-pep8, python-pyflakes.
gnu: python-pep8: Update to 1.7.0.
* gnu/packages/python.scm (python-pep8): Update to 1.7.0.
gnu: python-networkx: Update to 1.11.
* gnu/packages/python.scm (python-networkx): Update to 1.11.
gnu: python-hypothesis: Update to 3.0.4.
* gnu/packages/python.scm (python-hypothesis): Update to 3.0.4.
[native-inputs]: Remove python-setuptools.
(python2-hypothesis): Use 'strip-python2-variant'.
[native-inputs]: Add python2-enum34, python2-setuptools.