gnu: libmodbus: Update to 3.1.11.

* gnu/packages/engineering.scm (libmodbus): Update to 3.1.11.  Add a missing
newline after the package definition.
[source]: Add a patch which disables a test that requires networking.
* gnu/packages/patches/libmodbus-disable-networking-test.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.

Change-Id: I657c0aac3435ec20da6e15d31484effdb7c2dc0b

gnu: telegram-desktop: Update to version 5.12.3.

Add three patches to fix the compilation errors raised by gcc 11.
Note: https://github.com/desktop-app/cmake_helpers/pull/320 was merged,
so telegram-desktop-unbundle-gsl.patch is no longer needed.

* gnu/packages/telegram.scm (%telegram-version): Update to 5.12.3.
(codegen-for-telegram-desktop): Update to revision used by v5.12.3.
(lib-base-for-telegram-desktop): Likewise.
(lib-lottie-for-telegram-desktop): Likewise.
(lib-rpl-for-telegram-desktop): Likewise.
(lib-spellcheck-for-telegram-desktop): Likewise.
(lib-ui-for-telegram-desktop): Likewise.
(lib-webrtc-for-telegram-desktop): Likewise.
(cmake-helpers-for-telegram-desktop): Likewise;
Remove the obsolete patch.
(lib-tl-for-telegram-desktop):
Apply a patch to fix gcc-11 compilation error.
(telegram-desktop): Update to v5.12.3;
Apply patches to make it compile.
* gnu/packages/patches/telegram-desktop-unbundle-gsl.patch: Remove.
* gnu/packages/patches/lib-tl-for-telegram-memcpy.patch: New file.
* gnu/packages/patches/telegram-desktop-hashmap-incomplete-value.patch:
New file.
* gnu/packages/patches/telegram-desktop-qguiapp.patch: New file.
* gnu/local.mk: Adjust accordingly.

Change-Id: Iaa34ff2cd3f55aa92b1d9ba61a2ff66a72eb1132
Signed-off-by: Jonathan Brielmaier <jonathan.brielmaier@web.de>

gnu: marisa: Fix build on riscv64-linux.

* gnu/packages/patches/marisa-fix-MARISA_WORD_SIZE.patch: New patch.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/datastructures.scm (marisa)[source]: Add it.

Change-Id: Icd3a8b39663c7951623a374cca0b64b3ba3d255d

gnu: Add gdb-16.

* gnu/packages/gdb.scm (gdb-16): New variable.
* gnu/packages/patches/gdb-16-hurd64.patch: New patch.
* gnu/local.mk (dist_patch_DATA): Register it.

Change-Id: I15fb50be38258ce99ddf260ada0b3f6304c8ed4a

gnu: xinit: Fix broken mcookie path in startx.

* gnu/packages/patches/xinit-startx-mcookie-path.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register patch.
* gnu/packages/xorg.scm (xinit)[source]: Add patch.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>

gnu: ntp: Fix crash.

Fixes <https://issues.guix.gnu.org/76401>.

* gnu/packages/ntp.scm (ntp): Add patch.
* gnu/packages/patches/ntp-fix-dereferencing-the-wrong-variable.patch: Add patch.
* gnu/local.mk (dist_patch_DATA): Register patch.

Change-Id: Ib3524c13fb2a1e6c70f8733cac3faeb427d00296
Signed-off-by: Ludovic Courtès <ludo@gnu.org>

gnu: libvirt: Fix path to Linux modules.

* gnu/packages/virtualization.scm (libvirt): Use LINUX_MODULE_DIRECTORY to
find modules.
[source]: Add libvirt-respect-modules-path.patch.
* gnu/packages/patches/libvirt-respect-modules-path.patch: New file.
* gnu/local.mk: Register new file.
* gnu/services/virtualization.scm (libvirt-shepherd-service)
<#:environment-variables>: Pass LINUX_MODULE_DIRECTORY.

Change-Id: Idde5b59df3c1641fcbab376e6c694730769294d3
Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>

gnu: pdfpc: Update to 4.7.0.

* gnu/packages/patches/pdfpc-build-with-vala-0.56.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove patch.
* gnu/packages/pdf.scm (pdfpc): Update to 4.7.0.
[source]: Remove obsolete patch.
[inputs]: Replace webkitgtk-with-libsoup2 with webkitgtk-for-gtk3.

Change-Id: I9ecbf8fd878fe1be943e12085ae2a01a881df744

gnu: Add woof-doom.

* gnu/packages/patches/woof-doom-unbundle-spng-miniz.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/games.scm (woof-doom): New variable.

Change-Id: I77cfa0fd2f2a20d6eee5d0339b9673899bb0ecad
Signed-off-by: 宋文武 <iyzsong@member.fsf.org>

gnu: guile-emacs: Update to f2d0459d6a4cda8b7c38b6fb12a55f1330ba50fa.

* gnu/packages/patches/guile-emacs-build-fixes.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Unregister it.
* gnu/packages/emacs.scm (guile-emacs): Update to
f2d0459d6a4cda8b7c38b6fb12a55f1330ba50fa.
[inputs]: Add imagemagick.
[synopsis, description]: Update.
[arguments]: Add --with-imagemagick.  Remove #:tests? #f (upstream has
disabled the test suite).

Change-Id: I585e8884635c02f5df38d9418f04ac0ae750303d
Signed-off-by: Ian Eure <ian@retrospec.tv>

gnu: ganeti: Fix compilation.

* gnu/packages/patches/ganeti-openssh-test-fix.patch,
gnu/packages/patches/ganeti-sphinx-import.patch: New files.
* gnu/packages/virtualization.scm (ganeti)[source]: Use them.
[arguments]: Adjust ‘adjust-tests’ phase.
* gnu/local.mk (dist_patch_DATA): Add patches.

Change-Id: I21c4dd5e7210021e8905dc6237bd5148aeed930d
Signed-off-by: Ludovic Courtès <ludo@gnu.org>

gnu: sage: Update to 10.6.beta9.

* gnu/packages/patches/sage-update-pari-gp.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Unregister patch.
* * gnu/packages/sagemath.scm (source): Update to 10.6.beta9. Drop patch.

Change-Id: If01883f6f2fe36a79b385fb903eeba91fbcaef79

gnu: mercurial: Update to 6.7.2.

* gnu/packages/version-control.scm (mercurial): Update to 6.7.2.
[source]<origin>(patches): Remove mercurial-openssl-compat.patch.
* gnu/packages/patches/mercurial-hg-extension-path.patch: adapt for
mercurial 6.7.2.
* gnu/packages/patches/mercurial-openssl-compat.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Unregister it.

Change-Id: I1e22d7f38e264576bfa3adef7004fef582a1137e
Signed-off-by: Greg Hogan <code@greghogan.com>

tests: Move Avahi test to its own file.

This mirrors the (gnu services avahi) module.

* gnu/tests/base.scm (%avahi-os, run-nss-mdns-test, %test-nss-mdns):
Move to…
* gnu/tests/avahi.scm: … here.  New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.

Change-Id: I04705e57408619d948c928873c40c470aa4e949d

tests: Move mcron test to its own file.

This mirrors the (gnu services mcron) module.

* gnu/tests/base.scm (%mcron-os, run-mcron-test, %test-mcron): Move to…
* gnu/tests/mcron.scm: … here.  New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.

Change-Id: Id2830d08d8e797e008c5fec7964fb5f6a5ea2fad

gnu: faiss: Update to 1.10.0.

* gnu/packages/graph.scm (faiss): Update to 1.10.0.
[source]: Adapt snippet. Add patch.
[arguments]: Delete likely uneeded {phases}. Adapt {configure-flags}.
[native-inputs]: Add openmpi.
(python-faiss): Update to 1.10.0.
[build-system]: Switch to cmake-build-system.
[arguments]: Rewrite all arguments.
[inputs]: Improve-style. Switch python for python-wrapper.
[native-inputs]: Add python-scipy.
[propagated-inputs]: Remove python-matplotlib.

* gnu/packages/patches/faiss-tests-CMakeLists-find-googletest.patch:
Add patch.
* gnu/local.mk: Likewise.

Change-Id: Ia1d29af1b7ea1d8f0fe27fdbb8c6a355889bfd30
Signed-off-by: Ludovic Courtès <ludo@gnu.org>

gnu: Add tvm.

* gnu/packages/machine-learning.scm (tvm): New variable.
* gnu/packages/patches/tvm_fix_cpptest_build.patch: New file.
* gnu/local.mk: Register new file.

Change-Id: Icfee19fccc7cc1c9f6d5d6bb680b554d777f62d6
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>

gnu: qemu-7.2.4: Unregister patch.

* gnu/packages/patches/qemu-7.2.4-build-info-manual.patch: Remove
patch.
* gnu/local.mk: Unregister patch.

Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>

tests: Test installation on Debian.

* gnu/tests/foreign.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.

Change-Id: I1f24d83bdc298acbef15db2e19775cc1d3fbd56c

gnu: connman: Update to 1.43.

* gnu/packages/connman.scm (connman): Update to 1.43.
* gnu/packages/patches/connman-add-missing-libppp-compat.h.patch: Delete
obsolete patch.
* gnu/local.mk (dist_patch_DATA): De-register it.

Change-Id: I563f535c27b99972e95d96f291ce5dfdc83a46f1
Signed-off-by: 宋文武 <iyzsong@member.fsf.org>