gnu: python-archspec: Update to 0.2.5.

* gnu/packages/python-xyz.scm (python-archspec): Update to 0.2.5.
[propagated-inputs]: Remove python-boltons, python-cooler, python-ctxcore,
python-interlap, python-intervaltree, python-jsonschema,
python-networkx, python-numba, python-poetry-core, pyscenic,
python-scikit-learn, python-tables, and python-typing-extensions.
[native-inputs]: Remove python-black, python-flake8, python-isort, python-pylint, and
python-pytest-cov; add python-jsonschema.

Change-Id: I40c2d4b038877eb243daaf5f9f73127eb994d64f

gnu: python-dask: Move to python-science.

* gnu/packages/python-xyz.scm (python-dask, python-dask/bootstrap): Move
from here ...
* gnu/packages/python-science.scm: ... to here.

Change-Id: I6bedc89bd09b3f2dfc3f7cbe27eb5790f32f6af7

gnu: python-sparse: Move to python-science.

* gnu/packages/python-xyz.scm (python-sparse): Move from here ...
* gnu/packages/python-science.scm: ... to here.

Change-Id: I52b814e264aa2fe28adeaec46b868f2e3b8279ec

gnu: python-anndata: Move to python-science.

* gnu/packages/python-xyz.scm (python-anndata): Move from here ...
* gnu/packages/python-science.scm: ... to here.

Change-Id: I3d968728de04610984c08884bd29cd9c055fa284

gnu: python-multiscale-spatial-image: Move to python-science.

* gnu/packages/python-xyz.scm (python-multiscale-spatial-image): Move
from here ...
* gnu/packages/python-science.scm: ... to here.

Change-Id: Ib921389b3018e353d3eb85030bf63cbb9b68c213

gnu: python-dask-image: Move to python-science.

* gnu/packages/python-xyz.scm (python-dask-image): Move from here ...
* gnu/packages/python-science.scm: ... to here.

Change-Id: I1ede0dd1410c1efcc4601b7e91285112f9c9a7ea

gnu: python-pykdtree: Move to python-science.

* gnu/packages/python-xyz.scm (python-pykdtree): Move from here ...
* gnu/packages/python-science.scm: ... to here.

Change-Id: Id13b95eab7e590b01cd46375929303458cf9ac82

gnu: python-pykdtree: Update to 1.4.2.

* gnu/packages/python-xyz.scm (python-pykdtree): Update to 1.4.2.
[build-system]: Switch to pyproject-build-system.
[arguments]<#:tests?>: Disable them and explain why.
<#:phases>: Remove test files in output.
[native-inputs]: Replace python-cython by python-cython-3.

Change-Id: If5a7bb27b4c3af9075334360a57ae92f93d4fa35
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>

gnu: python-exif-read: Enable tests.

* gnu/packages/python-xyz.scm (python-exif-read)[source]: Fetch from
GitHub.
[arguments]: Remove '#:tests? #f'.
[native-inputs]: Add python-pytest.

Change-Id: Ieffb996948c4fd8873351c89fd26c5314139e9ae

gnu: python-exif-read: Update to 3.3.2.

* gnu/packages/python-xyz.scm (python-exif-read): Update to 3.3.2.
[source]: Update URI.
[build-system]: Use pyproject-build-system.
[native-inputs]: Add python-setuptools, python-wheel.

Change-Id: If6ec19f061f6e3d64550bba307616b7f1c545c0e

gnu: python-treelib: Update to 1.8.0.

* gnu/packages/python-xyz.scm (python-treelib): Update to 1.8.0.
[source]: Fetch from GitHub.
[build-system]: Use pyproject-build-system.
[native-inputs]: Add python-poetry-core, python-pytest.
[propagated-inputs]: Remove python-six.

Change-Id: I61fd3ba7da54ad97d547089f9f644673d129974c

gnu: python-srt: Enable tests.

* gnu/packages/python-xyz.scm (python-srt)[native-inputs]: Add
python-pytest.

Change-Id: I1d1bbac3c3aff6b59d485769263cc824ce937e18
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>

gnu: python-srt: Switch to pyproject-build-system.

* gnu/packages/python-xyz.scm (python-srt)[native-inputs]: Add
python-setuptools, python-wheel.

Change-Id: I7babe669543d975bb88fbc337a38bc507c8613f2
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>

gnu: python-srt: Update to 3.5.3.

* gnu/packages/python-xyz.scm (python-srt): Update to 3.5.3.

Change-Id: Ic5fb7a3da56689bc91b66e45c8c6429830bb69c6
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>

gnu: python-srt: Improve style.

* gnu/packages/python-xyz.scm (python-srt): Run guix style.

Change-Id: I0023088ba37030a08b2286335226d5899b45fe6f
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>

gnu: python-readability-lxml: Switch to pyproject-build-system.

* gnu/packages/python-xyz.scm (python-readability-lxml): Switch to
pyproject-build-system.  Drop arguments.
[native-inputs]: Add python-setuptools and python-wheel.

Change-Id: Ia85fb8c34af377f9c7d0caf70cfe7c18f473bcf9
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>

gnu: python-readability-lxml: Add missing input.

* gnu/packages/python-xyz.scm (python-readability-lxml)[propagated-inputs]:
Add python-lxml-html-clean.

Change-Id: I11fb7ce8cbf93ccab180536921114e039db62017
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>

gnu: python-lsp-server: Update to 1.13.0.

* gnu/packages/python-xyz.scm (python-lsp-server): Update to 1.13.0.
  [arguments] <test-flags>: Rework the list of skipped tests.
  [propagated-inputs]: Add python-black.
  [native-inputs]: Remove python-autopep8, python-flake8, python-numpy,
  python-pandas; add python-websockets.

Change-Id: I1e0087a43374085ccb95f15df5c9f9f24901d6ad
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>

gnu: python-dateparser: Improve package style.

* gnu/packages/python-xyz.scm (python-dateparser)[arguments]: Convert to list
of G-Expressions.  Move ‘delete-failing-tests’ into #:configure-flags.
[propagated-inputs, native-inputs]: Move after arguments.
Sort alphabetically and linewise.
[native-inputs]: Drop python-flake8.

Reviewed-by: Sharlatan Hellseher <sharlatanus@gmail.com>

gnu: python-dateparser: Fix build.

* gnu/packages/python-xyz.scm (python-dateparser)[#:test-flags]: Disable
“test_relative_base_setting_2_en”.

Reviewed-by: Sharlatan Hellseher <sharlatanus@gmail.com>