gnu: maxima: Update to 5.39.0.

* gnu/packages/maths.scm (maxima): Update to 5.39.0.

gnu: mumble: Update to 1.2.18.

* gnu/packages/telephony.scm (mumble): Update to 1.2.18.

gnu: python-docutils: Update to 0.13.1

* gnu/packages/python.scm(python-docutils): Update to 0.13.1.
[source]: Use pypi-uri.

build: check-final-inputs-self-contained has an exception for 'bash:include'.

Currently 'bash:include' of the final Bash depends on bootstrap stuff.

* build-aux/check-final-inputs-self-contained.scm (final-inputs): Add
clause for 'bash:include'.
* gnu/packages/commencement.scm (bash-final): Add FIXME comment.

gnu: yoshimi: Update to 1.5.0.

* gnu/packages/music.scm (yoshimi): Update to 1.5.0.

gnu: emacs-org: Update to 20161214.

* gnu/packages/emacs.scm (emacs-org): Update to 20161214.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>

gnu: youtube-dl: Update to 2016.12.15.

* gnu/packages/video.scm (youtube-dl): Update to 2016.12.15.

gnu: r: Update to 3.3.2.

* gnu/packages/statistics.scm (r): Update to 3.3.2.

gnu: Add attribution line for Raoul Bonnal.

This is a follow-up commit to c9e9154e993f055a438e2e43518bbd0740aaaf24.

* gnu/packages/bioinformatics.scm: Add attribution.

gnu: sane-backends: Remove timestamps from the output.

* gnu/packages/scanner.scm (sane-backends-minimal)[source](modules, snippet):
New fields.

gnu: Add and use sane-backends.

* gnu/packages/scanner.scm (sane-backends): New variable.
* gnu/packages/gnome.scm (colord, simple-scan): Use it instead of
'sane-backends-minimal'.
* gnu/packages/libreoffice.scm (libreoffice): Likewise.
* gnu/packages/wine.scm (wine): Likewise.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>

gnu: Add and use sane-backends-minimal.

* gnu/packages/scanner.scm (sane-backends): Rename to...
(sane-backends-minimal): this. Adjust name, source, synopsis and
description accordingly.
* gnu/packages/cups.scm (hplip): Use 'sane-backends-minimal' instead of
'sane-backends'.
* gnu/packages/gnome.scm (colord, simple-scan): Likewise.
* gnu/packages/libreoffice.scm (libreoffice): Likewise.
* gnu/packages/wine.scm (wine): Likewise.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>

gnu: sane-backends: Disable backend generation.

* gnu/packages/scanner.scm (sane-backends)[arguments]: Add a phase to
disable the compilation of backends.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>

gnu: pinentry: Update to 1.0.0.

* gnu/packages/gnupg.scm (pinentry-tty, pinentry-gtk2, pinentry-gnome3,
pinentry-qt): Update to 1.0.0.

gnu: npth: Update to 1.3.

* gnu/packages/gnupg.scm (npth): Update to 1.3.

gnu: bootstrap: Add FTP URL for bootstrap binaries.

* gnu/packages/bootstrap.scm (%bootstrap-base-urls): Add
ftp://alpha.gnu.org (http://alpha.gnu.org is currently unresponsive.)

gnu: star: Update to 2.5.2b.

* gnu/packages/bioinformatics (star): Update to 2.5.2b.
[source]: Delete precompiled binary.

Co-authored-by: Ben Woodcroft <donttrustben@gmail.com>

gnu: Add fatfsck-static.

* gnu/packages/disk.scm (dosfstools/static): New private variable.
(fatfsck/static): New variable.

gnu: Add emacs-guix.

* gnu/packages/emacs.scm (emacs-guix): New variable.

gnu: Add emacs-bui.

* gnu/packages/emacs.scm (emacs-bui): New variable.