gnu: perl-sql-abstract: Update source uri.

* gnu/packages/databases.scm (perl-sql-abstract)[source]: Update source uri.

gnu: perl-dbd-pg: Update to 3.7.0.

* gnu/packages/databases.scm (perl-dbd-pg): Update to 3.7.0

gnu: perl-sql-abstract: Update to 1.84.

* gnu/packages/databases.scm (perl-sql-abstract): Update to 1.84

gnu: perl-dbix-class-schema-loader: Update to 0.07047.

* gnu/packages/databases.scm (perl-dbix-class-schema-loader): Update to
0.07047

gnu: perl-dbi: Update to 1.637.

* gnu/packages/databases.scm (perl-dbi): Update to 1.637

gnu: mongodb: Use scons-build-system.

* gnu/packages/databases.scm (mongodb): Switch to scons-build-system.

gnu: mongodb: Remove some bundled sources.

* gnu/packages/databases.scm (mongodb)[source]: Add snippet to remove
some of the bundled sources.
[input]: Remove unused boost input.

gnu: mongodb: Use system wiredtiger when available.

* gnu/packages/databases.scm (mongodb)[inputs]: Add wiredtiger on
64-bit systems.
[arguments]: When using wiredtiger, use system wiredtiger.

gnu: mongodb: Build without wiredtiger on 32-bit systems.

* gnu/packages/databases.scm (mongodb)[arguments]: Add a configure-flag
to build without wiredtiger support on 32-bit systems.

gnu: mongodb: Update to 3.4.10.

* gnu/packages/databases.scm (mongodb): Update to 3.4.10.

gnu: Add python-pyodbc.

* gnu/packages/databases.scm (python-pyodbc, python2-pyodbc): New variables.

gnu: Move database packages from python.scm to databases.scm.

* gnu/packages/python.scm (python-ccm, python2-ccm, python2-pysqlite,
python-sqlalchemy, python2-sqlalchemy, python-sqlalchemy-utils,
python2-sqlalchemy-utils, python-alembic, python2-alembic,
python-pickleshare, python2-pickleshare, python-apsw, python2-apsw,
python2-neo4j-driver, python2-py2neo, python-psycopg2, python2-psycopg2,
python-sadisplay, python2-sadisplay, python-mysqlclient,
python2-mysqlclient, python-hiredis, python2-hiredis, python-fakeredis,
python2-fakeredis, python-redis, python2-redis, python-rq, python2-rq,
python-trollius-redis, python2-trollius-redis, python-sqlparse,
python2-sqlparse, python-sql, python2-sql): Move from here...
* gnu/packages/databases.scm: ...to here.
* gnu/packages/tryton.scm,
gnu/packages/python-web.scm,
gnu/packages/nutrition.scm,
gnu/packages/medical.scm: Adjust accordingly.

gnu: Add guile-wiredtiger.

* gnu/packages/databases.scm (guile-wiredtiger): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>

gnu: Move test packages from perl to perl-check.

* gnu/packages/perl.scm (perl-test2-bundle-extended,
perl-test2-plugin-nowarnings, perl-test-base, perl-test-class,
perl-test-class-most, perl-test-cleannamespaces, perl-test-command,
perl-test-cpan-meta, perl-test-cpan-meta-json, perl-test-deep,
perl-test-differences, perl-test-directory, perl-test-eol,
perl-test-exception, perl-test-fatal, perl-test-file-sharedir-dist,
perl-test-files, perl-test-harness, perl-test-leaktrace,
perl-test-longstring, perl-test-manifest, perl-test-memory-cycle,
perl-test-mockobject, perl-test-mocktime, perl-test-most, perl-test-needs,
perl-test-notabs, perl-test-nowarnings, perl-test-number-delta,
perl-test-output, perl-test-pod, perl-test-pod-coverage, perl-test-requires,
perl-test-script, perl-test-sharedfork, perl-test-simple, perl-test-taint,
perl-test-tester, perl-test-trap, perl-test-utf8, perl-test-warn,
perl-test-warnings, perl-test-without-module, perl-test-writevariants,
perl-test-yaml, perl-test-trailingspace): Move variables to ...
* gnu/packages/perl-check.scm: ... this new file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* gnu/packages/admin.scm,
gnu/packages/bioinformatics.scm,
gnu/packages/crypto.scm,
gnu/packages/databases.scm,
gnu/packages/glib.scm,
gnu/packages/gnupg.scm,
gnu/packages/image-viewers.scm,
gnu/packages/language.scm,
gnu/packages/networking.scm,
gnu/packages/package-management.scm,
gnu/packages/perl.scm,
gnu/packages/terminals.scm,
gnu/packages/tex.scm,
gnu/packages/version-control.scm,
gnu/packages/web.scm,
gnu/packages/xml.scm,
gnu/packages/xorg.scm: Use perl-check module.

gnu: postgresql@9.6: Update to 9.6.6 [security fixes].

This fixes CVE-2017-12172, CVE-2017-15098, CVE-2017-15099.

* gnu/packages/databases.scm (postgresql@9.6): Update to 9.6.6.

gnu: postgresql: Update to 10.1 [security fixes].

Fixes CVE-2017-12172, CVE-2017-15098 and CVE-2017-15099.

* gnu/packages/databases.scm (postgresql): Update to 10.1.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>

gnu: Add r-rmysql.

* gnu/packages/databases.scm (r-rmysql): New variable.

gnu: redis: Update to 4.0.2.

* gnu/packages/databases.scm (redis): Update to 4.0.2.

gnu: Add sqlite-with-fts3.

* gnu/packages/databases.scm (sqlite-with-fts3): New variable.

Co-authored-by: Pierre Langlois <pierre.langlois@gmx.com>

gnu: python-lmdb: Update to 0.93.

* gnu/packages/databases.scm (python-lmdb): Update to 0.93.