~ruther/guix-local: 41df2ab16d19bed223cb5d04f7ddee70db41d9a5

41df2ab1 — Sharlatan Hellseher 1 year, 2 months ago

gnu: r-hdf5dataframe: Update to 0.0.0-2.1e30e6b.

* gnu/packages/bioinformatics.scm (r-hdf5dataframe): Update to 0.0.0-2.1e30e6b.
[native-inputs]: Add r-testthat.

Change-Id: I4b7b933dd8fe668d03f3e04ccd78336b4efa7e5f

e716c800 — Sharlatan Hellseher 1 year, 2 months ago

gnu: python-mudata: Update to 0.3.2.

* gnu/packages/bioinformatics.scm (python-mudata): Update to 0.3.2.

Change-Id: I60c2b5d16dd1afddafc5f06231d6c5bf28a4b20c

b91c64a3 — Sharlatan Hellseher 1 year, 2 months ago

gnu: python-anndata: Update to 0.12.1.

* gnu/packages/python-science.scm (python-anndata): Update to 0.12.1.
  [arguments] <test-flags>: Rework ignored and skipped tests.
  [propagated-inputs]: Remove python-exceptiongroup and
  python-numcodecs; add python-legacy-api-wrap.
  [native-inputs]: Remove python-pytest-doctestplus, python-toml, and
  python-flit.

Change-Id: I46c46c73f3a232345cc029d79b1018290505f5af

123ec7f7 — Sharlatan Hellseher 1 year, 2 months ago

gnu: python-zarr: Update to 2.18.7.

* gnu/packages/python-xyz.scm (python-zarr): Update to 2.18.7.
[native-inputs]: Remove python-pytest-doctestplus, python-sphinx,
python-sphinx-copybutton, python-sphinx-design, and
python-sphinx-issues.

Change-Id: I9db3ffe51bb9daba53b0759a4c6a5814ff285b83

e3c74605 — Nicolas Graves 1 year, 2 months ago

gnu: python-case: Deprecate package.

* gnu/packages/python-check.scm (python-case): Deprecate variable.
* gnu/packages/python-xyz.scm (python-kombu, python-billiard,
python-celery)[native-inputs]: Remove python-case.

Change-Id: I98d19e88aa5b8fa2b47f347a4d0c958d71096e4e
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>

35f2fd68 — Nicolas Graves 1 year, 2 months ago

gnu: python-case: Move to (gnu packages python-check).

* /gnu/packages/python-xyz.scm (python-case): Move from here…
* gnu/packages/python-check.scm (python-case): …to here.

Change-Id: I59379226031edbd4dc63c70f15725b488668d05c
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>

2484aec8 — Nicolas Graves 1 year, 2 months ago

gnu: python-curtsies: Update to 0.4.3.

* gnu/packages/terminals.scm (python-curtsies): Update to 0.4.3.

Change-Id: I516134ed9a3a02be805498f76b552a8ab1e4411d
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>

4fda9a96 — Nicolas Graves 1 year, 2 months ago

gnu: python-pyte: Update to 0.8.2.

* gnu/packages/terminals.scm (python-pyte): Update to 0.8.2.

Change-Id: I6255a5598d86cb02f74c36c393e58d09f6a9b9a9
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>

3a3573fa — Nicolas Graves 1 year, 2 months ago

gnu: python-rchitect: Update to 0.4.8.

* gnu/packages/statistics.scm (python-rchitect): Update to 0.4.8.

Change-Id: If96584dc8ebec144ddb2ea9c0743b5ec36105abf
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>

1679d707 — Nicolas Graves 1 year, 2 months ago

gnu: python-py2bit: Update to 0.3.3.

* gnu/packages/bioinformatics.scm (python-py2bit): Update to 0.3.3.
[native-inputs]: Add python-setuptools-scm.

Change-Id: Ib7e9d701595501e5da76288e5a8cae32e1dc6739
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>

0dba518c — Nicolas Graves 1 year, 2 months ago

gnu: python-radian: Update to 0.6.15.

* gnu/packages/statistics.scm (python-radian): Update to 0.6.15.

Change-Id: Ic0b3227884ff7fef0b9b9a3b166da14ddc90dcb3
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>

bac69dec — Nicolas Graves 1 year, 2 months ago

gnu: python-pyro-api: Switch to pyproject.

* gnu/packages/machine-learning.scm (python-pyro-api):
[source]: Switch to git-fetch.
[build-system]: Switch to pyproject-build-system.
[native-inputs]: Add python-setuptools, python-wheel.

Change-Id: Iab866450e9ab7104ecba8ff21bf34e8a4226e1b2
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>

fc194e77 — Nicolas Graves 1 year, 2 months ago

gnu: python-pytest-isort: Switch to pyproject.

* gnu/packages/python-check.scm (python-pytest-isort):
[source]: Switch to git-fetch.
[build-system]: Switch to pyproject-build-system.
[arguments]: Remove them.
[native-inputs]: Add python-poetry-core.
[home-page]: Refresh.

Change-Id: I712fcdd2bb659b5f9d2a8fbfca2d8cd0d2cdb127
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>

77faad4a — Nicolas Graves 1 year, 2 months ago

gnu: python-pyte: Switch to pyproject.

* gnu/packages/terminals.scm (python-pyte):
[source]: Switch to git-fetch.
[build-system]: Switch to pyproject-build-system.
[arguments]: Remove them.
[native-inputs]: Add python-setuptools, python-wheel.  Remove
python-pytest-runner.

Change-Id: I6467cc03b9d71de5a5b70f39def7f409a64bdfce
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>

2f1dd4f3 — Nicolas Graves 1 year, 2 months ago

gnu: python-asyncmy: Update to 0.2.10.

* gnu/packages/databases.scm (python-asyncmy): Update to 0.2.10.
[source]: Switch to git-fetch.
[build-system]: Switch to pyproject-build-system.
[arguments]<#:tests?>: Disable them for now.
<#:phases>: Replace 'check phase. Add a 'cleanup phase.
[native-inputs]: Add mysql, python-poetry-core, python-pytest,
python-pytest-asyncio, python-setuptools, python-wheel.

Change-Id: I759a85d29372b0d50c2d8992ee303724b7462958
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>

11902d48 — Nicolas Graves 1 year, 2 months ago

gnu: python-css-html-js-minify: Update to 2.5.5-0.8f72452.

* gnu/packages/python-web.scm (python-css-html-js-minify): Update to 2.5.5-0.8f72452.
[source]: Switch to git-fetch.
[build-system]: Switch to pyproject-build-system.
[arguments]<#:phases>: Add phase 'relax-requirements.
[native-inputs]: Add python-setuptools, python-wheel.

Change-Id: I54bbaee60b8f7291f8bac14edf2ac83c23149efb
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>

ea571d67 — Nicolas Graves 1 year, 2 months ago

gnu: python-pytimeparse: Switch to pyproject.

* gnu/packages/time.scm (python-pytimeparse):
[source]: Switch to git-fetch.
[build-system]: Switch to pyproject-build-system.
[arguments]<#:phases>: Add a 'cleanup phase. Replace the check phase.
[native-inputs]: Add python-setuptools, python-wheel.

Change-Id: Ic8aa640789556b8583e24069291003063c794a29
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>

483ac59d — Nicolas Graves 1 year, 2 months ago

gnu: python-sphinxcontrib-programoutput: Switch to pyproject.

* gnu/packages/sphinx.scm (python-sphinxcontrib-programoutput):
[source]: Switch to git-fetch.
[build-system]: Switch to pyproject-build-system.
[arguments]<#:phases>: Add a cleanup phase to avoid pytest
malfunction.
[native-inputs]: Add python-pytest, python-setuptools, python-wheel.
[home-page]: Update and reorder field.

Change-Id: I38a290fc6b7868db39b57dd75ed9d0ae3e9c5147
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>

c4302309 — Nicolas Graves 1 year, 2 months ago

gnu: python-nbsphinx: Switch to pyproject.

* gnu/packages/sphinx.scm (python-nbsphinx):
[source]: Switch to git-fetch.
[build-system]: Switch to pyproject-build-system.
[arguments]<#:tests?>: Disable them.
[native-inputs]: Add python-setuptools, python-wheel.

Change-Id: I37beb7447618f8aec8f8b6df897aa86ac454dd2a
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>

99f7b8fc — Nicolas Graves 1 year, 2 months ago

gnu: python-test-utils: Switch to pyproject.

* gnu/packages/python-check.scm (python-test-utils):
[build-system]: Switch to pyproject-build-system.
[native-inputs]: Add python-setuptools, python-wheel.

Change-Id: Ifc02d90691e1d72cff5ba9034ee99718ebff2051
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>