Merge branch 'master' into core-updates

Merge branch 'xorg-updates'

gnu: gmsh: Add glu to inputs.

* gnu/packages/maths.scm (gmsh): Add glu to inputs.

Merge branch 'master' into 'core-updates'.

gnu: atlas: Remove MIPS from 'supported-systems'.

* gnu/packages/maths.scm (atlas): Drop support for "mips64el-linux".

gnu: atlas: Try to fix build on MIPS.

* gnu/packages/maths.scm (atlas): Add MIPS specific configure flags.

gnu: atlas: Make it non-substitutable.

Suggested by Federico Beffa <beffa@ieee.org>.

* gnu/packages/maths.scm (atlas)[arguments]: Pass #:substitutable? #f.
  [description]: Adjust accordingly.

gnu: Some cleanup based on lint checkers.

* gnu/packages/admin.scm, gnu/packages/aidc.scm, gnu/packages/algebra.scm,
  gnu/packages/apr.scm, gnu/packages/avahi.scm, gnu/packages/backup.scm,
  gnu/packages/base.scm, gnu/packages/calcurse.scm, gnu/packages/cdrom.scm,
  gnu/packages/check.scm, gnu/packages/compression.scm, gnu/packages/cook.scm,
  gnu/packages/crypto.scm, gnu/packages/cryptsetup.scm, gnu/packages/curl.scm,
  gnu/packages/cyrus-sasl.scm, gnu/packages/databases.scm,
  gnu/packages/doxygen.scm, gnu/packages/dwm.scm, gnu/packages/elf.scm,
  gnu/packages/emacs.scm, gnu/packages/feh.scm, gnu/packages/file.scm,
  gnu/packages/fish.scm, gnu/packages/flex.scm, gnu/packages/fltk.scm,
  gnu/packages/fontutils.scm, gnu/packages/games.scm, gnu/packages/gcal.scm,
  gnu/packages/gcc.scm, gnu/packages/geeqie.scm, gnu/packages/ghostscript.scm,
  gnu/packages/gimp.scm, gnu/packages/gl.scm, gnu/packages/glib.scm,
  gnu/packages/gnome.scm, gnu/packages/gnunet.scm, gnu/packages/gnupg.scm,
  gnu/packages/gperf.scm, gnu/packages/grub.scm, gnu/packages/gsasl.scm,
  gnu/packages/gtk.scm, gnu/packages/guile-wm.scm, gnu/packages/guile.scm,
  gnu/packages/hurd.scm, gnu/packages/icu4c.scm, gnu/packages/image.scm,
  gnu/packages/imagemagick.scm, gnu/packages/irssi.scm, gnu/packages/kde.scm,
  gnu/packages/libdaemon.scm, gnu/packages/libevent.scm,
  gnu/packages/libidn.scm, gnu/packages/libusb.scm, gnu/packages/linux.scm,
  gnu/packages/lout.scm, gnu/packages/lsh.scm, gnu/packages/lsof.scm,
  gnu/packages/lua.scm, gnu/packages/maths.scm, gnu/packages/mcrypt.scm,
  gnu/packages/mp3.scm, gnu/packages/netpbm.scm, gnu/packages/noweb.scm,
  gnu/packages/ocaml.scm, gnu/packages/openssl.scm, gnu/packages/pcre.scm,
  gnu/packages/pdf.scm, gnu/packages/pkg-config.scm,
  gnu/packages/pretty-print.scm, gnu/packages/python.scm, gnu/packages/qt.scm,
  gnu/packages/rsync.scm, gnu/packages/scheme.scm, gnu/packages/scrot.scm,
  gnu/packages/sdl.scm, gnu/packages/skribilo.scm, gnu/packages/ssh.scm,
  gnu/packages/stalonetray.scm, gnu/packages/tcl.scm, gnu/packages/tcsh.scm,
  gnu/packages/telephony.scm, gnu/packages/texlive.scm, gnu/packages/tor.scm,
  gnu/packages/valgrind.scm, gnu/packages/version-control.scm,
  gnu/packages/vim.scm, gnu/packages/vpn.scm, gnu/packages/w3m.scm,
  gnu/packages/web.scm, gnu/packages/wordnet.scm, gnu/packages/xiph.scm,
  gnu/packages/xml.scm, gnu/packages/xorg.scm, gnu/packages/zile.scm,
  gnu/packages/zip.scm, gnu/packages/zsh.scm [synopsis, description]: Adjust
  according to lint checkers.
* gnu/packages/fltk.scm (fltk)[source]: Wrap long line in uri.
* /gnu/packages/xiph.scm (libogg, libtheora, vorbis-tools)[source]: Same.

gnu: Add ATLAS.

* gnu/packages/maths.scm (atlas): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>

gnu: pspp: Upgrade to 0.8.4.

* gnu/packages/maths.scm (pspp): Upgrade to 0.8.4.

gnu: Add dionysus.

* gnu/packages/maths.scm (dionysus): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>

gnu: maxima: Install .el files in the right place, and help find Gnuplot.

* gnu/packages/maths.scm (maxima): Remove Tcl from 'inputs'.  Add
  'post-install' phase.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>

gnu: maxima: Update to 5.34.1 and add dependencies.

* gnu/packages/maths.scm (maxima): Update to 5.34.1 which fixes a bug in
  the plotting capabilities present in the previous version.  Add Gnuplot
  and Tcl/Tk to 'inputs'.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>

Use #:prefix instead of #:renamer with 'symbol-prefix-proc'.

* gnu/packages/abiword.scm, gnu/packages/admin.scm, gnu/packages/aidc.scm,
  gnu/packages/backup.scm, gnu/packages/bittorrent.scm,
  gnu/packages/boost.scm, gnu/packages/compression.scm,
  gnu/packages/cryptsetup.scm, gnu/packages/curl.scm,
  gnu/packages/cyrus-sasl.scm, gnu/packages/dc.scm, gnu/packages/emacs.scm,
  gnu/packages/fonts.scm, gnu/packages/fontutils.scm, gnu/packages/geeqie.scm,
  gnu/packages/ghostscript.scm, gnu/packages/gimp.scm,
  gnu/packages/gkrellm.scm, gnu/packages/gl.scm, gnu/packages/glib.scm,
  gnu/packages/gnome.scm, gnu/packages/gnunet.scm, gnu/packages/gnupg.scm,
  gnu/packages/gnutls.scm, gnu/packages/gnuzilla.scm, gnu/packages/gsasl.scm,
  gnu/packages/gtk.scm, gnu/packages/gv.scm, gnu/packages/image.scm,
  gnu/packages/indent.scm, gnu/packages/inkscape.scm,
  gnu/packages/lesstif.scm, gnu/packages/links.scm, gnu/packages/lisp.scm,
  gnu/packages/lsh.scm, gnu/packages/lsof.scm, gnu/packages/maths.scm,
  gnu/packages/mp3.scm, gnu/packages/openssl.scm, gnu/packages/ots.scm,
  gnu/packages/pciutils.scm, gnu/packages/pcre.scm, gnu/packages/pdf.scm,
  gnu/packages/pulseaudio.scm, gnu/packages/python.scm, gnu/packages/slim.scm,
  gnu/packages/ssh.scm, gnu/packages/texlive.scm, gnu/packages/vim.scm,
  gnu/packages/vpn.scm, gnu/packages/web.scm, gnu/packages/wv.scm,
  gnu/packages/xiph.scm, gnu/packages/xml.scm, gnu/packages/xorg.scm,
  gnu/packages/yasm.scm, gnu/packages/zip.scm,
  guix/build/cmake-build-system.scm, guix/build/perl-build-system.scm,
  guix/build/python-build-system.scm, guix/download.scm: Replaces uses of
  #:renamer and 'symbol-prefix-proc' with #:prefix.

gnu: Fix typos.

* gnu/packages/cdrom.scm (cdparanoia): Double space in description.
* gnu/packages/maths.scm (hdf5): Double space in synopsis.

Merge branch 'master' into core-updates

Conflicts:
	gnu-system.am

gnu: Adjust synopses as recommended by 'guix lint'.

Remove leading articles and trailing periods in package synopses.

gnu: Synchronize GNU package descriptions with upstream.

These are mostly two-space-after-end-of-sentence-period changes
resulting from commit 3a09e1d2.

Merge branch 'master' into core-updates

Conflicts:
	gnu/packages/image.scm

gnu: glpk: Update to 4.55.

* gnu/packages/maths.scm (glpk): Update to 4.55.