gnu: Update wlroots to 0.17.1.

Keep the older version as wlroots-0.16 since a few packages break without it.

* gnu/packages/wm.scm (wlroots): Update to 0.17.1.
[source]: Add patch.
[propagated-inputs]: Add libdisplay-info.
* gnu/packages/patches/wlroots-hwdata-fallback.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/wm.scm (wlroots-0.16): New variable.
* gnu/packages/wm.scm (cage)[inputs]: Replace wlroots with wlroots-0.16.
* gnu/packages/wm.scm (fnott)[inputs]: Likewise.
* gnu/packages/wm.scm (dwl)[inputs]: Likewise.
* gnu/packages/wm.scm (sway)[inputs]: Likewise.
* gnu/packages/wm.scm (cagebreak)[inputs]: Likewise.
* gnu/packages/wm.scm (hikari)[inputs]: Likewise.
* gnu/packages/wm.scm (river)[native-inputs]: Likewise.

Change-Id: Ib3d3938d6486fb1674380811a6dc0a512c991ac7
Signed-off-by: John Kehayias <john.kehayias@protonmail.com>

gnu: r-sgloptim: Apply patch to fix build.

* gnu/packages/patches/r-sgloptim.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/cran.scm (r-sgloptim)[source]: Apply it.

Change-Id: I6435ec1dfadcffac684c378cd074777a19cd0d7f

gnu: Add restartd.

* gnu/packages/admin.scm (restartd): New variable.
* gnu/packages/patches/restartd-update-robust.patch: Add file.
* gnu/local.mk: Register gnu/packages/patches/restartd-update-robust.patch.

Change-Id: I38b9b70e97b64f006a86d7618a75f1ec3ed8b034
Signed-off-by: Ludovic Courtès <ludo@gnu.org>

gnu: arpack-ng: Update to 3.9.1.

* gnu/packages/maths.scm (arpack-ng): Update to 3.9.1. Drop patch.
* gnu/packages/patches/arpack-ng-propagate-rng-state.patch: Remove file.
* gnu/packages/maths.scm (dist_patch_DATA): Unregister patch.

Change-Id: I33a666c3a88fb2f6791c8d698eeb054a831103fc

gnu: Add (gnu packages golang-compression) module.

* gnu/packages/golang-compression.scm: New file.
* gnu/local.mk: Add to gnu/packages/golang-compression.scm scope.

Change-Id: I1c68a3f6f9b3d6a316cba560b7fc81e707376417

gnu: Add (gnu packages golang-build) module.

* gnu/packages/golang-build.scm: New file.
* gnu/local.mk: Add to gnu/packages/golang-build.scm scope.

Change-Id: I4605d44452859b47ed6369a234c7ead496b19c2a

gnu: avalon-toolkit: Update to 2.0.5a.

The bug freeing static memory and the makefile have been improved upstream, so
we don't have to work around them anymore. Now, two static libraries are built
instead.

* gnu/packages/chemistry.scm (avalon-toolkit): Update to 2.0.5a.
[source]: Switch to git reference from GitHub. Adjust snippet. Add patch from
the RDKit fork.
[arguments]: Remove 'dont-free-static-memory phase. Use provided
makefile. Adjust 'install phase.
* gnu/packages/patches/avalon-toolkit-rdkit-fixes.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Christopher Baines <mail@cbaines.net>

gnu: opam: Update to 2.1.5.

* gnu/packages/ocaml.scm (opam): Update to 2.1.5.
  [native-inputs]: Add more test data.
  [arguments]: Disable failing test.
  (ocaml-graph): Update to 2.0.0.
  (ocaml-dose3): Update to 7.0.0.
* gnu/packages/patches/ocaml-dose3-Fix-for-ocaml-4.06.patch: Remove.
* gnu/packages/patches/ocaml-dose3-Install-mli-cmx-etc.patch: Remove.
* gnu/packages/patches/ocaml-dose3-add-unix-dependency.patch: Remove.
* gnu/packages/patches/ocaml-dose3-dont-make-printconf.patch: Remove.
* gnu/local.mk (dist_path_DATA): Unregister removed patches.

Change-Id: Ie715998a6d7740332187e1fe0742631964ba5a8a
Signed-off-by: Julien Lepiller <julien@lepiller.eu>

gnu: coq: Update to 8.17.1.

* gnu/packages/coq.scm (coq): Update to 8.17.1 and merge with coq-core and coq-stdlib.
  [arguments] Merge with coq-core and coq-stdlib. Add pre-build phases and
  add a custom install phase. Remove unnecessary test-target.
  [source](patches): Remove.
  [native-search-paths]: Remove COQLIBPATH and COQCORELIB.
  (coq-core): Remove variable.
  (coq-stdlib): Remove variable.
  (coq-ide)[propagated-inputs]: Add zlib.
  (coq-mathcomp-bigenough)[propagated-inputs]: Remove coq-core.
  (coq-mathcomp-finmap)[inputs]: Remove coq-stdlib.
  (coq-equations): Update to 1.3-8.17.
* gnu/packages/patches/coq-fix-envvars.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.

Co-authored-by: Josselin Poiret <dev@jpoiret.xyz>
Signed-off-by: Julien Lepiller <julien@lepiller.eu>
Change-Id: I0a0d9f7a6e06dd19ce1b66051334476d85f4f195

gnu: libgeotiff: Fix build with proj 9.3.1.

* gnu/packages/geo.scm (libgeotiff): [source]: Add patches to fix build
  with proj 9.3.1.
* gnu/local.mk: Add patch files.
* gnu/packages/patches/libgeotiff-fix-tests-on-i386.patch: New file.
* gnu/packages/patches/libgeotiff-fix-tests-with-proj-9.3.0.patch: New
  file.
* gnu/packages/patches/libgeotiff-fix-tests-with-proj-9.3.1.patch: New
  file.

Change-Id: I5f09e793698b0b137888faa0f595ef06850c6160
Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>

gnu: Register missing patch.

* gnu/local.mk (dist_patch_DATA): Add missing patch.

Change-Id: I82264a8cbea1550522994292e24f702f7cc78700

gnu: spdlog: Update to 1.13.0.

* gnu/packages/logging.scm (spdlog): Update to 1.13.0.
[source]: Remove upstreamed patch.
* gnu/local.mk: Unregister it.
* gnu/packages/patches/spdlog-fix-tests.patch: Delete file.

Change-Id: I78b5021b9841d16f43a283eaee931b4f92746ab8
Signed-off-by: Ludovic Courtès <ludo@gnu.org>

gnu: torbrowser: Stop inheriting Icecat.

* gnu/local.mk (GNU_SYSTEM_MODULES): Add packages/tor-browsers.scm.
* gnu/packages/gnupg.scm: Remove fix for dependency loop (fixed because we use
a new file).
* gnu/packages/tor-browsers.scm (mozilla-locale, mozilla-locales,
%torbrowser-locales, %moz-build-date, %torbrowser-version,
%torbrowser-firefox-version, translation-base-browser,
translation-tor-browser, torbrowser-assets, torbrowser): New variables.
(make-torbrowser): New procedure, which is a merge of ‘make-torbrowser’ (from
tor.scm) with ‘icecat-minimal’ (from gnuzilla.scm).
* gnu/packages/tor.scm (%moz-build-date, %torbrowser-version,
%torbrowser-firefox-version, %torbrowser-locales, translation-base-browser,
translation-tor-browser, torbrowser-assets, torbrowser): Remove variables.

Change-Id: I5fcf73e53fe4481a18e13cdeb3515c3dc4430090

gnu: Add (gnu packages golang-xyz) module.

* gnu/packages/golang-xyz.scm: New file.
* gnu/local.mk: Add to gnu/packages/golang-xyz.scm scope.

Change-Id: I25e434de1adc29c2f08146f040755287c63632d6

gnu: r-sapa: Patch call of dstebz routine.

* gnu/packages/patches/r-sapa-lapack.patch: New patch.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/cran.scm (r-sapa)[source]: Add it.

Change-Id: I17354c4e8b3a0f322e17c9a1e17bc37c93630105

gnu: lugaru: Apply patch fixing sound.

* gnu/packages/patches/lugaru-fix-sound.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/games.scm (lugaru) [source]: Update source URL.
Apply patch.
[arguments]: Use gexps.
[inputs]: Remove labels and sort.

Change-Id: Iebefc9fc43d3473e51c8c732539e6aa2f14d9f5f

gnu: Add (gnu packages golang-crypto) module.

* gnu/packages/golang-crypto.scm: New file.
* gnu/local.mk: Add to gnu/packages/golang-crypto.scm scope.

Change-Id: I92a110f31a74c5a54c59ee2a0f17373915be1b35

home: Add home-dotfiles-service.

* gnu/home/service/dotfiles.scm: New file;
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* po/guix/POTFILES.in: Add it.
* doc/guix.texi (Essential Home Services): Document it.

Change-Id: I6769169cfacefc3842faa5b31bee081c56c28743
Co-authored-by: Ludovic Courtès <ludo@gnu.org>

gnu: Add cl-rpcq.

* gnu/packages/quantum.scm: New file.
  (cl-rpcq, sbcl-rpcq): New variables.
* gnu/local.mk (GNU_SYSTEM_MODULES): Register "quantum.scm".

Change-Id: Ic893ad22ffb7a3bf9aa5e841fcf4c14bf3a23b2f
Co-authored-by: Guillaume Le Vaillant <glv@posteo.net>

gnu: python-flint: Update to 0.5.0 and build with flint@3.

* gnu/packages/patches/python-flint-includes.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Unregister file.
* gnu/packages/algebra.scm (python-flint): Update to 0.5.0.
[source]: Drop patch.
[inputs]: Drop arb.
[native-inputs]: Use python-cython-3.

Change-Id: I5fa9b201efff76e16f957aee0ebcd453ea823e69