~ruther/guix-local

ref: 21e583def33ecf9e9bae3a18df875cd3380e14ec guix-local/gnu/packages/bioinformatics.scm -rw-r--r-- 62.4 KiB
51c64999 — Ricardo Wurmus 11 years ago
gnu: Add sra-tools.

* gnu/packages/bioinformatics.scm (sra-tools): New variable.
75dd2424 — Ricardo Wurmus 11 years ago
gnu: Add NCBI VDB.

* gnu/packages/bioinformatics.scm (ncbi-vdb): New variable.
2651a5e6 — Ricardo Wurmus 11 years ago
gnu: Add NGS Java bindings.

* gnu/packages/bioinformatics.scm (ngs-java): New variable.
282c5087 — Ricardo Wurmus 11 years ago
gnu: Add NGS SDK.

* gnu/packages/bioinformatics.scm (ngs-sdk): New variable.
85c37e29 — Ricardo Wurmus 11 years ago
gnu: Add Biopython.

* gnu/packages/bioinformatics.scm (python-biopython, python2-biopython): New
  variables.
933204e5 — Mark H Weaver 11 years ago
Merge branch 'master' into core-updates

Conflicts:
	gnu-system.am
	gnu/packages/gstreamer.scm
2127cedb — Ricardo Wurmus 11 years ago
gnu: Add FASTX Toolkit.

* gnu/packages/bioinformatics.scm (fastx-toolkit): New variable.
8214b7fb — Ricardo Wurmus 11 years ago
gnu: rseqc: Update hash.

* gnu/packages/bioinformatics.scm (rseqc): Update hash.
1ca8ff28 — Mark H Weaver 11 years ago
Merge branch 'master' into core-updates
5854f685 — Ricardo Wurmus 11 years ago
gnu: Add GRIT.

* gnu/packages/bioinformatics.scm (grit): New variable.
c833ab55 — Ricardo Wurmus 11 years ago
gnu: Add Shogun.

* gnu/packages/bioinformatics.scm (shogun): New variable.
cf3e3e37 — 宋文武 11 years ago
Merge branch 'master' into core-updates
bfe3c685 — Ricardo Wurmus 11 years ago
gnu: Add clustal omega.

* gnu/packages/bioinformatics.scm (clustal-omega): New variable.
023dd28a — Ludovic Courtès 11 years ago
Merge branch 'master' into core-updates
c5372108 — Ricardo Wurmus 11 years ago
gnu: pbtranscript-tofu: Add missing inputs.

* gnu/packages/bioinformatics.scm (pbtranscript-tofu)[inputs]: Add missing
  runtime inputs.
49261e45 — Ricardo Wurmus 11 years ago
gnu: pbtranscript-tofu: Delete pre-built libraries.

* gnu/packages/bioinformatics.scm (pbtranscript-tofu)[arguments]: Delete
  "build" directory and any shared objects after unpacking.
de07c0db — Ricardo Wurmus 11 years ago
gnu: Add vcftools.

* gnu/packages/bioinformatics.scm (vcftools): New variable.
8e913213 — Ricardo Wurmus 11 years ago
gnu: Add cutadapt.

* gnu/packages/bioinformatics.scm (cutadapt): New variable.
25d5b708 — Ludovic Courtès 11 years ago
Merge branch 'master' into core-updates
2c16316e — Ricardo Wurmus 11 years ago
gnu: Add pbtranscript-tofu.

* gnu/packages/bioinformatics.scm (pbtranscript-tofu): New variable.
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