gnu: python-omnipath: Update to 1.0.10.

* gnu/packages/python-web.scm (python-omnipath): Update to 1.0.10. Style package.
[arguments][test-flags]: Enable now passing test.
[arguments][phase]: Remove custom phase pretend-version.
[native-inputs]: Remove python-setuptools, python-setuptools-scm, python-tox, and
python-wheel; add python-hatchling.

Change-Id: Ia209644349a18ceabb37b9c3c557288a627f6aa7

gnu: python-nox: Remove development inputs.

* gnu/packages/python-check.scm (python-nox):
[native-inputs]: Remove python-tox.

Change-Id: I650e4255ffcd330c6209e100902cff0604b450ea

Revert "gnu: python-nox: Update to 2025.10.16."

This reverts commit c8bcee5741a57931c08c8607bcc2f8b886d25420.

Change-Id: I57a32e27dc72caeccf454d67413630301aa06a5b

gnu: python-pybadges: Remove development inputs.

* gnu/packages/python-web.scm (python-pybadges):
[native-inputs]: Remove python-nox.

Change-Id: I3051aed8c3b4fcf1816897ae61a922b00130f9a5

gnu: emacs-jedi: Remove development inputs.

* gnu/packages/emacs-xyz.scm (emacs-jedi):
[native-inputs]: Remove python-tox.

Change-Id: Id73daf81ace4a904f72c0fc1064a182e8b3faf53

gnu: python-scikit-misc: Remove development inputs.

* gnu/packages/python-science.scm (python-scikit-misc):
[arguments][phases][fix-pytest-config]: New phase.
[propagated-inputs]: Remove python-twine.
[native-inputs]: Remove python-pytest-cov.

Change-Id: I4f52ff2819775d65fd205f6222c8fba854161580

gnu: python-pyahocorasick: Update to 2.2.0.

* gnu/packages/bioinformatics.scm (python-pyahocorasick): Update to 2.2.0.
[native-inputs]: Remove python-twine and python-wheel.

Change-Id: If9901abaae4f52a795d1b9b84f06a3b8cc6fc235

gnu: python-ngesh: Remove development inputs.

* gnu/packages/bioinformatics.scm (python-ngesh): [native-inputs]: Remove
python-black, python-flake8, python-twine, and python-wheel.

Change-Id: Ie401b481f768774732fdf021e52530af644856c7

gnu: python-metacells: Remove development inputs

* gnu/packages/bioinformatics.scm (python-metacells):
[native-inputs]: Remove python-sphinx and python-sphinx-rtd-theme.

Change-Id: Ifdac5e0a841be105a8e6c82441826d11b2a9031e

gnu: python-hatch-jupyter-builder: Remove development inputs.

* gnu/packages/jupyter.scm (python-hatch-jupyter-builder):
[native-inputs]: Remove python-pytest-cov and python-twine.

Change-Id: I8889de1b3015c03c5f03cd3c2233007fdb97b7fb

gnu: python-cftime: Update to 1.6.5.

Also remove development inputs.

* gnu/packages/python-xyz.scm (python-cftime): Update to 1.6.5.
[native-inputs]: Remove python-twine.

Change-Id: I41d2061e6bf0435bc16e04519631b5333f7e0737

gnu: mdpo: Remove development inputs.

* gnu/packages/gettext.scm (mdpo): [native-inputs]: Remove python-flake8,
python-flake8-implicit-str-concat, python-flake8-print, python-isort,
python-pytest-cov, python-sphinx, python-sphinx-argparse,
python-sphinx-rtd-theme, and python-twine.

Change-Id: I8fd82815f7e37645e86530c4acfa6999aa09ca1a

gnu: fava: Remove development inputs.

* gnu/packages/finance.scm (fava): [native-inputs]: Remove python-mypy,
python-pytest-cov, python-twine, and python-wheel.

Change-Id: Ia6cb181d1c17be7db07a613a793e8a886f9108a7

gnu: python-moto: Fix tests, don't run in parallel.

The project provides a mixture of thread save and threads untolerated
test suites. Tests took 705.18s in a single thread while they were timed
out when threading was enabled after 3827s. This change reworks skipped
tests and run them in a single thread.

* gnu/packages/python-xyz.scm (python-moto): Use G-Expressions.
[arguments] <test-flags>: Rework skipped tests and run them in a single
thread.
<phases>: Remove 'compatibility as no longer required; add 'pre-check.
[native-inputs]: Remove python-pytest-xdist and python-wheel; add
python-pycognito and python-pyotp.

Fixes: guix/guix#3678
Change-Id: I735d035c31c29435ad5774c5e38b0e3f1a2e19bd

gnu: python-pyjwt: Update to 2.10.1.

* gnu/packages/python-xyz.scm (python-pyjwt): Update to 2.10.1.
[arguments] <test-flags>: Skip one test.
[native-inputs]: Remove python-coverage, python-cryptography,
python-sphinx, python-sphinx-rtd-theme, and python-wheel.
[propagated-inputs]: Set python-cryptography as optional when supported.

Change-Id: I936dcee1b6b06636e8ae6ee2cfaad886ac716f95

gnu: Add python-pycognito.

* gnu/packages/python-web.scm (python-pycognito): New variable.

Change-Id: Ida34ee953d5e5b05dade2a3c78476198125a2932

gnu: Add python-envs.

* gnu/packages/python-xyz.scm (python-envs): New variable.

Change-Id: I2d660f2f24a150ba8cb4dce9e3c3e101b1df0425

gnu: trealla: Update to 2.83.20.

* gnu/packages/prolog.scm (trealla): Update to 2.83.20.

Change-Id: I476777d2b59f2bbf8f5427da962d3ba6cd071727

gnu: obs: Disable websocket support.

* gnu/packages/video.scm (obs): Disable websocket support, which fixes
the build.

Fixes: guix/guix#3582
Change-Id: I7103941412dd2d4b2103ab61558bd3a8ae9cfce9
Signed-off-by: Andreas Enge <andreas@enge.fr>

gnu: liblognorm: Update to 2.0.7.

* gnu/packages/c.scm (liblognorm): Update to 2.0.7.
[source]: Remove ".git" suffix from the URL.

Change-Id: I8834901534138e7d700a466408e7862884b91604

tests: Update Archlinux image for foreign install test.

* guix/tests/foreign.scm (archlinux-qcow2): update URL and checksum.
  (%test-archlinux-install): add comment on possible test failure.

Change-Id: Ib1d6040f416a0a1117f956bc15111a0240dfb86b
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>