gnu: gd: Fix CVE-2016-{5766,6128,6132,6214}.
* gnu/packages/patches/gd-CVE-2016-5766.patch,
gnu/packages/patches/gd-CVE-2016-6128.patch,
gnu/packages/patches/gd-CVE-2016-6132.patch,
gnu/packages/patches/gd-CVE-2016-6214.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/gd.scm (gd): Use patches.
gnu: lsh: Move to (gnu packages ssh)
* gnu/packages/lsh.scm: Remove. Move 'lsh and liboop' to...
* gnu/packages/ssh.scm (liboop, lsh): ... here. New variables.
* gnu/services/ssh.scm, gnu/services/base.scm: Adjust accordingly.
* gnu/local.mk (GNU_SYSTEM_MODULES): Adjust accordingly.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
gnu: libmtp: Update to 1.1.11.
* gnu/packages/patches/libmtp-devices.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove patch.
* gnu/packages/libusb.scm (libmtp): Update to 1.1.11.
gnu: Add python-dendropy.
* gnu/packages/bioinformatics.scm (python-dendropy, python2-dendropy): New
variables.
* gnu/packages/patches/python-dendropy-exclude-failing-tests.patch: New
file.
* gnu/local.mk (dist_patch_DATA): Add it.
gnu: sudo: Update to 1.8.17p1.
* gnu/packages/admin.scm (sudo): Update to 1.8.17p1.
[source]: Remove patch.
* gnu/packages/patches/sudo-CVE-2015-5602.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
gnu: openimageio: Update to 1.6.15.
* gnu/packages/graphics.scm (openimageio): Update to 1.6.15.
[source]: Remove patch.
* gnu/packages/patches/openimageio-boost-1.60.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
gnu: gimp: Fix CVE-2016-4994.
* gnu/packages/patches/gimp-CVE-2016-4994.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/gimp.scm (gimp): Use it.
gnu: avrdude: Use libusb-compat.
* gnu/packages/patches/avrdude-fix-libusb.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
* gnu/packages/flashing-tools.scm (avrdude)[source]: Remove patch.
[inputs]: Replace "libusb" with "libusb-compat".
gnu: Add khmer.
* gnu/packages/bioinformatics.scm (khmer): New variable.
* gnu/packages/patches/khmer-use-libraries.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
services: Add 'mcron-service'.
* gnu/services/mcron.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* gnu/tests/base.scm (%mcron-os, %test-mcron): New variables.
(run-mcron-test): New procedure.
* doc/guix.texi (Scheduled Job Execution): New node.
gnu: lightning: Move to (gnu packages assembly).
* gnu/packages/lightning.scm: Remove. Move 'lightning' to...
* gnu/packages/assembly.scm (lightning): ... here. New variable.
* gnu/local.mk (GNU_SYSTEM_MODULES): Adjust accordingly.
gnu: beets: Update to 1.3.18.
* gnu/packages/patches/beets-image-test-failure.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/music.scm (beets): Update to 1.3.18.
[source]: Use patch.
gnu: nasm: Make build bit-reproducible.
* gnu/packages/patches/nasm-no-ps-pdf.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/assembly.scm (nasm): Use it. Remove ghostscript, do not
build PS or PDF docs. Makes build bit-reproducible.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
gnu: Add ruby-puma.
gnu/packages/ruby.scm (ruby-puma): New variable.
gnu/packages/patches/ruby-puma-ignore-broken-test.patch: New file.
gnu/local.mk (dist_patch_DATA): Add it.
gnu: yasm: Move to (gnu packages assembly).
* gnu/packages/yasm.scm: Remove. Move 'yasm' to...
* gnu/packages/assembly.scm (yasm): ... here. New variable.
* gnu/local.mk (GNU_SYSTEM_MODULES): Adjust accordingly.
gnu: Add nasm.
* gnu/packages/assembly.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
Co-authored-by: Ludovic Courtès <ludo@gnu.org>
tests: Add system installation test.
* gnu/tests.scm (define-os-with-source): New macro.
* gnu/tests/install.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* build-aux/run-system-tests.scm (%system-tests): Likewise.
gnu: Add awesome.
* gnu/packages/wm.scm (awesome): New variable.
* gnu/packages/patches/awesome-reproducible-png.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
Co-authored-by: Ludovic Courtès <ludo@gnu.org>