~ruther/guix-local: gnu: python-scanpy: Set PYTHONPATH variable.

~ruther/guix-local

e74bcbc64fc32db22985723e9caa4f0b0bbb38d1 — Ricardo Wurmus 4 years ago 6c9bbf8

gnu: python-scanpy: Set PYTHONPATH variable.

This is a follow-up to commit 664721422cd17c151df00b9ecab268d1aa18e3b3.

* gnu/packages/bioinformatics.scm (python-scanpy)[arguments]: Set PYTHONPATH
variable during the build as GUIX_PYTHONPATH does not have the intended
effect.

patch browse .tar.gz .zip

1 files changed, 1 insertions(+), 1 deletions(-)

M gnu/packages/bioinformatics.scm

M gnu/packages/bioinformatics.scm => gnu/packages/bioinformatics.scm +1 -1

@@ 11956,7 11956,7 @@ implementation differs in these ways:
                ;; packaged yet.
                (delete-file "scanpy/tests/external/test_scanorama_integrate.py")
 
-               (setenv "GUIX_PYTHONPATH"
+               (setenv "PYTHONPATH"
                        (string-append (getcwd) ":"
                                       (assoc-ref inputs "python-anndata:source") ":"
                                       (getenv "GUIX_PYTHONPATH")))