~ruther/guix-local: gnu: python-scanpy: Use GUIX_PYTHONPATH.

664721422cd17c151df00b9ecab268d1aa18e3b3 — Ricardo Wurmus 4 years ago a22fb2d

gnu: python-scanpy: Use GUIX_PYTHONPATH.

* gnu/packages/bioinformatics.scm (python-scanpy)[arguments]: Use
GUIX_PYTHONPATH instead of PYTHONPATH.

patch browse .tar.gz .zip

1 files changed, 2 insertions(+), 2 deletions(-)

M gnu/packages/bioinformatics.scm

M gnu/packages/bioinformatics.scm => gnu/packages/bioinformatics.scm +2 -2

@@ 11956,10 11956,10 @@ implementation differs in these ways:
                ;; packaged yet.
                (delete-file "scanpy/tests/external/test_scanorama_integrate.py")
 
-               (setenv "PYTHONPATH"
+               (setenv "GUIX_PYTHONPATH"
                        (string-append (getcwd) ":"
                                       (assoc-ref inputs "python-anndata:source") ":"
-                                      (getenv "PYTHONPATH")))
+                                      (getenv "GUIX_PYTHONPATH")))
                (invoke "pytest" "-vv"
                        "-k"
                        ;; Plot tests that fail.