~ruther/guix-local

ada8242a7198f27d04440ffbd38d26d21be2383f — Sharlatan Hellseher 3 months ago 0d78581
gnu: htseq: Update to 2.0.9.

* gnu/packages/bioinformatics.scm (htseq): Update to 2.0.9.
[propagated-inputs]: Remove python-matplotlib.
[native-inputs]: Remove python-wheel; add python-matplotlib.

Change-Id: I026cd0ecf01418b4c112b8d0f2f6c0ab709c38d7
Signed-off-by: Rutherther <rutherther@ditigal.xyz>
1 files changed, 4 insertions(+), 6 deletions(-)

M gnu/packages/bioinformatics.scm
M gnu/packages/bioinformatics.scm => gnu/packages/bioinformatics.scm +4 -6
@@ 8816,8 8816,7 @@ HMMs).")
(define-public htseq
  (package
    (name "htseq")
    (version "2.0.2")
    ;; Sources on pypi do not include everything needed to run the tests.
    (version "2.0.9")
    (source (origin
              (method git-fetch)
              (uri (git-reference


@@ 8826,19 8825,18 @@ HMMs).")
              (file-name (git-file-name name version))
              (sha256
               (base32
                "1kbr4ydjjhizz6r5m3xd4f0wj7qnn8zs0vnzghhgaa0yhbya5r19"))))
                "1wyv5aqdx1i48i01xnav1cvv5zjv9n4nxplcgplwzxz9pxiw3kcb"))))
    (build-system pyproject-build-system)
    (propagated-inputs
     (list python-matplotlib
           python-numpy
     (list python-numpy
           python-pysam))
    (native-inputs
     (list python-cython
           python-matplotlib
           python-pandas
           python-pytest
           python-scipy
           python-setuptools
           python-wheel
           swig))
    (home-page "https://github.com/htseq")
    (synopsis "Framework for analyzing high-throughput sequencing data")