~ruther/guix-local

9103fbd2e6f5fbe1743e2bb0fca558db4e0ab1e1 — Andreas Enge 5 months ago 1ffec44
gnu: Remove pbcopper.

* gnu/packages/bioinformatics.scm (pbcopper): Delete variable.

Fixes: guix/guix#3781
Change-Id: Ibde3554af08d72f2e3d64c9e1a4226871402bbec
1 files changed, 0 insertions(+), 32 deletions(-)

M gnu/packages/bioinformatics.scm
M gnu/packages/bioinformatics.scm => gnu/packages/bioinformatics.scm +0 -32
@@ 743,38 743,6 @@ databases to perform alignment and is more robust.  Because it is
alignment-free, it runs much faster and also easier to use.")
    (license license:gpl2+)))

(define-public pbcopper
  (package
    (name "pbcopper")
    (version "2.0.0")
    (source (origin
              (method git-fetch)
              (uri (git-reference
                    (url "https://github.com/PacificBiosciences/pbcopper")
                    (commit (string-append "v" version))))
              (file-name (git-file-name name version))
              (sha256
               (base32
                "04mgmla96bsmr9gijbn3ibspry625cv4kqqxv70z4jq4qc407jy3"))))
    (build-system meson-build-system)
    (arguments
     `(#:phases
       (modify-phases %standard-phases
         (add-after 'unpack 'patch-meson-files
           (lambda _
             (substitute* "meson.build"
               (("-msse4.1") "")))))))
    (inputs
     (list boost))
    (native-inputs
     (list googletest pkg-config))
    (home-page "https://github.com/PacificBiosciences/pbcopper")
    (synopsis "Data structures, algorithms, and utilities for PacBio C++ applications")
    (description
     "The pbcopper library provides a suite of data structures, algorithms,
and utilities for PacBio C++ applications.")
    (license license:bsd-3)))

(define-public r-anglemania
  (let ((commit "f27399fb947adfa0de6134493e737658ca591af5")
        (revision "1"))