From 9103fbd2e6f5fbe1743e2bb0fca558db4e0ab1e1 Mon Sep 17 00:00:00 2001 From: Andreas Enge Date: Mon, 24 Nov 2025 11:11:47 +0100 Subject: [PATCH] gnu: Remove pbcopper. * gnu/packages/bioinformatics.scm (pbcopper): Delete variable. Fixes: guix/guix#3781 Change-Id: Ibde3554af08d72f2e3d64c9e1a4226871402bbec --- gnu/packages/bioinformatics.scm | 32 -------------------------------- 1 file changed, 32 deletions(-) diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index b37efeb1f7ece5642b80db0ea05318411797335b..8efbf0fc153e4d85d14373b81c4dfb5a03f41bff 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -743,38 +743,6 @@ databases to perform alignment and is more robust. Because it is alignment-free, it runs much faster and also easier to use.") (license license:gpl2+))) -(define-public pbcopper - (package - (name "pbcopper") - (version "2.0.0") - (source (origin - (method git-fetch) - (uri (git-reference - (url "https://github.com/PacificBiosciences/pbcopper") - (commit (string-append "v" version)))) - (file-name (git-file-name name version)) - (sha256 - (base32 - "04mgmla96bsmr9gijbn3ibspry625cv4kqqxv70z4jq4qc407jy3")))) - (build-system meson-build-system) - (arguments - `(#:phases - (modify-phases %standard-phases - (add-after 'unpack 'patch-meson-files - (lambda _ - (substitute* "meson.build" - (("-msse4.1") ""))))))) - (inputs - (list boost)) - (native-inputs - (list googletest pkg-config)) - (home-page "https://github.com/PacificBiosciences/pbcopper") - (synopsis "Data structures, algorithms, and utilities for PacBio C++ applications") - (description - "The pbcopper library provides a suite of data structures, algorithms, -and utilities for PacBio C++ applications.") - (license license:bsd-3))) - (define-public r-anglemania (let ((commit "f27399fb947adfa0de6134493e737658ca591af5") (revision "1"))