~ruther/guix-local: gnu: scregseg: Patch for numpy compatibility.

5762420f9c04fe3cdb2af09cbed74b7fdb92b032 — Ricardo Wurmus 1 year, 3 months ago d4baa43

gnu: scregseg: Patch for numpy compatibility.

* gnu/packages/bioinformatics.scm (scregseg)[arguments]: Add phase
'compatibility.

Change-Id: I738d675c10acdbae7d40b3f806703ba8f7936a19

patch browse .tar.gz

1 files changed, 5 insertions(+), 0 deletions(-)

M gnu/packages/bioinformatics.scm

M gnu/packages/bioinformatics.scm => gnu/packages/bioinformatics.scm +5 -0

@@ 23395,6 23395,11 @@ populations.")
          (add-before 'check 'build-extensions
            (lambda _
              (invoke "python" "setup.py" "build_ext" "--inplace")))
+         ;; NumPy 1.20 deprecated the type wrappers for int and float.
+         (add-after 'unpack 'compatibility
+           (lambda _
+             (substitute* "src/scregseg/_utils.pyx"
+               (("np.float") "float"))))
          (add-after 'unpack 'do-not-fail-to-find-sklearn
            (lambda _
              ;; XXX: I have no idea why it cannot seem to find sklearn.